Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 181) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 11.940367
 2  A*68:03-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 7.290096
 3  A*68:03-B*39:45-DRB1*04:07  Mexico Mixtec 6.300097
 4  A*68:03-B*35:01-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 4.1284218
 5  A*68:03-B*35:12-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 3.731367
 6  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 3.4404218
 7  A*68:03:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.777872
 8  A*68:03-B*39:08-DRB1*08:02  Mexico Mixtec 2.100097
 9  A*68:03-B*39:08-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 2.080096
 10  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.7483143
 11  A*68:03-B*39:05-C*07:02-DRB1*04:07  USA Mexican American Mestizo 1.6000553
 12  A*68:03:01-B*35:43:01-C*01:02:01-DRB1*04:07  Nicaragua Mestizo (G) 1.5852155
 13  A*68:03:02-B*35:01:01  Mexico Guadalajara Mestizo pop 2 1.5000103
 14  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 1.492567
 15  A*68:03-B*35:43-C*01:02-DRB1*04:03-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 1.492567
 16  A*68:03-B*39:05  Cuba Caucasian 1.400070
 17  A*68:03-B*35:43-C*01:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 1.0823339
 18  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 19  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 20  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*05:03-DQB1*03:04  Mexico Chichen Itza Maya (prehispanic) 1.063847
 21  A*68:03-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 22  A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 23  A*68:03-B*40:02-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:04  Mexico Chichen Itza Maya (prehispanic) 1.063847
 24  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 1.0523261,235
 25  A*68:03:01-B*35:01:01-C*07:02:01-DRB1*04:07  Nicaragua Mestizo (G) 0.9677155
 26  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.9174218
 27  A*68:03-B*35:43-C*01:02-DRB1*04:10-DQA1*03:01-DQB1*04:02-DPB1*03:01  Nicaragua Managua 0.8658339
 28  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.74801,999
 29  A*68:03-B*35:01-C*04:01-DRB1*13:02-DQA1*01:02-DQB1*05:01  Mexico Tixcacaltuyub Maya 0.746367
 30  A*68:03-B*39:02-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 31  A*68:03-B*39:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 32  A*68:03-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 33  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02  Mexico Tixcacaltuyub Maya 0.746367
 34  A*68:03-B*39:05-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01  Mexico Tixcacaltuyub Maya 0.746367
 35  A*68:03-B*39:05-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01  Mexico Tixcacaltuyub Maya 0.746367
 36  A*68:03-B*40:02-C*04:01-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 37  A*68:03-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 38  A*68:03-B*40:08-C*03:04-DRB1*04:25-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 39  A*68:03-B*48:01-C*08:03-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 40  A*68:03-B*39:05-C*07:02-DRB1*04:11-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 41  A*68:03:01-B*15:08:01-C*01:02:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 42  A*68:03:01-B*35:01:01-C*04:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 43  A*68:03:01-B*40:02:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 44  A*68:03:01-B*48:01:01-C*04:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 45  A*68:03:01-B*51:01:01-C*15:02:01-DRB1*04:03:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 46  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.6881218
 47  A*68:03-B*39:05  USA Hispanic pop 2 0.66201,999
 48  A*68:03-B*40:02-DRB1*14:02-DQB1*03:01  Mexico Veracruz Xalapa 0.595284
 49  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.5534146,714
 50  A*68:03-B*15:10-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 51  A*68:03-B*40:02-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 52  A*68:03:01-B*53:01:01-C*04:01:01-DRB1*07:01  Costa Rica African -Caribbean (G) 0.4902102
 53  A*68:03-B*35:01-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 54  A*68:03-B*35:01-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*02:01  Mexico Chiapas Lacandon Mayans 0.4587218
 55  A*68:03-B*39:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 56  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*03:01  Mexico Chiapas Lacandon Mayans 0.4587218
 57  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 58  A*68:03-B*39:05-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 59  A*68:03:01-B*35:43:01-C*01:02:01-DRB1*04:03:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 60  A*68:03:01-B*35:43:01-C*01:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 61  A*68:03:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 62  A*68:03-B*35:43-C*01:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339
 63  A*68:03:01-B*35:43:01-C*01:02:01-DRB1*04:03:01  Nicaragua Mestizo (G) 0.3502155
 64  A*68:03-B*35:12-C*04:01-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 65  A*68:03-B*35:16-C*04:01-DRB1*14:54-DQB1*05:03  Mexico Mexico City Mestizo population 0.3497143
 66  A*68:03-B*38:01-C*07:02-DRB1*04:11-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 67  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 68  A*68:03-B*39:08-C*07:17-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 69  A*68:03:01-B*08:01:01-C*07:17:01-DRB1*03:01  Nicaragua Mestizo (G) 0.3226155
 70  A*68:03:01-B*15:15-C*04:01:01-DRB1*08:02:01  Nicaragua Mestizo (G) 0.3226155
 71  A*68:03:01-B*35:17:01-C*03:03:01-DRB1*04:10:01  Nicaragua Mestizo (G) 0.3226155
 72  A*68:03-B*44:03-C*07:02-DRB1*07:01-DQA1*03:01-DQB1*02:02-DPB1*17:01  USA San Diego 0.2600496
 73  A*68:03-B*35:01-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 74  A*68:03-B*35:01-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.2294218
 75  A*68:03-B*35:01-C*07:02-DRB1*08:01-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:01  Mexico Chiapas Lacandon Mayans 0.2294218
 76  A*68:03-B*35:01-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 77  A*68:03-B*35:12-C*04:01-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 78  A*68:03-B*35:12-C*04:01-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 79  A*68:03-B*39:05-C*07:02-DRB1*08:01-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:01  Mexico Chiapas Lacandon Mayans 0.2294218
 80  A*68:03-B*39:05-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 81  A*68:03:01-B*35:01:01-C*03:04:01-DRB1*14:02-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 0.2262221
 82  A*68:03:01-B*35:01:01-C*07:02:01-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.2262221
 83  A*68:03-B*08:01-C*07:01-DRB1*04:07-DQA1*03:01-DQB1*02:01-DPB1*04:02  Nicaragua Managua 0.2165339
 84  A*68:03-B*15:01-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*14:01  Nicaragua Managua 0.2165339
 85  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:01-DPB1*03:01  Nicaragua Managua 0.2165339
 86  A*68:03-B*35:17-C*04:01-DRB1*04:05-DQA1*03:01-DQB1*03:02-DPB1*04:01  Nicaragua Managua 0.2165339
 87  A*68:03-B*35:17-C*04:01-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 88  A*68:03-B*35:20-C*04:01-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 89  A*68:03-B*35:43-C*01:02-DRB1*04:10-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 90  A*68:03-B*35:43-C*01:02-DRB1*14:02-DQA1*05:01-DQB1*03:04-DPB1*01:01  Nicaragua Managua 0.2165339
 91  A*68:03-B*35:43-C*02:02-DRB1*04:04-DQA1*03:01-DQB1*06:05-DPB1*04:02  Nicaragua Managua 0.2165339
 92  A*68:03-B*35:43-C*05:01-DRB1*14:02-DQA1*05:01-DQB1*02:02-DPB1*02:01  Nicaragua Managua 0.2165339
 93  A*68:03-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 94  A*68:03-B*39:08-C*07:17-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPB1*03:01  Nicaragua Managua 0.2165339
 95  A*68:03-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 96  A*68:03-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 97  A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 98  A*68:03-B*40:02-C*03:05-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPB1*02:01  Nicaragua Managua 0.2165339
 99  A*68:03-B*44:02-C*05:01-DRB1*13:01-DQA1*01:03-DQB1*03:01-DPB1*02:01  Nicaragua Managua 0.2165339
 100  A*68:03-B*52:01-C*03:03-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 181) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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