Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

Please specify your search by selecting options from boxes. Then, click "Search" to find HLA Haplotype frequencies that match your criteria. Remember at least one option must be selected.
A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 100 (from 305) records   Pages: 1 2 3 4 of 4  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*02:04-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 19.800073
 2  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 11.940367
 3  B*39:05-C*07:02  Mexico Oaxaca Zapotec 11.600090
 4  A*24:02-B*39:05-C*07:02-DRB1*04:03-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 9.300073
 5  B*39:05-C*07:02  Mexico Mexico City Mestizo population 9.0909143
 6  B*39:05-C*07:02  Mexico Oaxaca Mixtec 9.0000103
 7  A*68:03-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 7.290096
 8  B*39:05-C*07:02  Mexico Mexico City Mestizo pop 2 7.2600234
 9  A*24-B*39:05-DRB1*14:02-DQA1*05:01-DQB1*03:01  Colombia Jaidukama 5.800039
 10  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 5.5944143
 11  A*02:04-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*14:01  Venezuela Sierra de Perija Yucpa 4.700073
 12  A*68:01-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 4.1284218
 13  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 4.0600234
 14  A*02:06-B*39:05-DRB1*04:04  Mexico Oaxaca Zapotec 4.000090
 15  A*24:02-B*39:05-DRB1*04:07  Mexico Mixtec 3.900097
 16  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 3.4404218
 17  A*24:02-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 3.410096
 18  A*02:06-B*39:05-DRB1*16:02  Mexico Oaxaca Mixtec 3.0000103
 19  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 20  A*31:01-B*39:05-DRB1*08:02  Mexico Mixtec 2.100097
 21  B*39:05-C*07:02  USA Hispanic 2.1000234
 22  A*31:01-B*39:05-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 2.080096
 23  B*39:05-C*07:02  USA Hispanic pop 2 2.02801,999
 24  B*39:05-C*07:02  Mexico Oaxaca Mixe 1.900055
 25  A*24:02-B*39:05-DRB1*04:04  Mexico Oaxaca Jamiltepec Mixtec 1.800096
 26  A*31:01-B*39:05-C*08:03-DRB1*16:02-DQA1*05:05-DQB1*03:01  Brazil Puyanawa 1.7486150
 27  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.7483143
 28  A*68:03-B*39:05-C*07:02-DRB1*04:07  USA Mexican American Mestizo 1.6000553
 29  A*31:01-B*39:05-C*08:01-DRB1*16:02-DQA1*05:05-DQB1*03:01  Brazil Puyanawa 1.5847150
 30  A*02:06-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 1.560096
 31  A*68:03-B*39:05  Cuba Caucasian 1.400070
 32  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.3986143
 33  B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 1.3986143
 34  A*31:01-B*39:05-C*03:04-DRB1*08:02  Brazil Vale do Ribeira Quilombos 1.3889144
 35  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.2800234
 36  A*68:01-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 1.280096
 37  A*02:04-B*39:05-C*07:02-DRB1*16:02-DQA1*05:01-DQB1*03:01-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 1.200073
 38  A*02:13-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*14:01  Venezuela Sierra de Perija Yucpa 1.200073
 39  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 1.1468218
 40  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 41  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 42  B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 1.0700234
 43  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 44  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 45  A*24:02-B*39:05-C*07:02-DRB1*14:02-DQA1*05:01-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 46  A*68:01-B*39:05-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*04:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 47  A*68:01-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 48  A*32:01-B*39:05-C*17:01-DRB1*04:07-DQB1*06:04  Colombia North Chimila Amerindians 1.063847
 49  A*68:01-B*39:05-C*03:04-DRB1*04:04-DQB1*04:02  Colombia North Chimila Amerindians 1.063847
 50  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 1.0523261,235
 51  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 52  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 53  A*02:01-B*39:05-DRB1*04:04  Mexico Oaxaca Jamiltepec Mixtec 1.040096
 54  A*02:06-B*39:05-DRB1*16:02  Mexico Oaxaca Jamiltepec Mixtec 1.040096
 55  A*02:12-B*39:05-DRB1*08:02  New Zealand Maori with Admixed History 0.9524105
 56  A*68:05-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Amerindians (G) 0.8065125
 57  A*68:01-B*39:05-DRB1*04:04  Mexico Oaxaca Jamiltepec Mixtec 0.800096
 58  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.74801,999
 59  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 60  A*31:01-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 61  A*68:01-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 62  A*68:03-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 63  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02  Mexico Tixcacaltuyub Maya 0.746367
 64  A*68:03-B*39:05-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01  Mexico Tixcacaltuyub Maya 0.746367
 65  A*68:03-B*39:05-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01  Mexico Tixcacaltuyub Maya 0.746367
 66  A*68:03-B*39:05-C*07:02-DRB1*04:11-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 67  B*39:05-C*07:02-DRB1*04:11-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 68  A*02:01:01-B*39:05:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 69  A*68:01-B*39:05-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.6881218
 70  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 0.6700261,235
 71  A*31:01-B*39:05-C*08:03-DRB1*16:02-DQA1*01:02-DQB1*03:02  Brazil Puyanawa 0.6667150
 72  A*68:03-B*39:05  USA Hispanic pop 2 0.66201,999
 73  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.6494339
 74  B*39:05-C*07:02-DRB1*14:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.6400234
 75  B*39:05-C*07:02-DRB1*16:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.6400234
 76  A*02:06-B*39:05  USA Hispanic pop 2 0.63601,999
 77  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.5534146,714
 78  A*11:01-B*39:05-C*04:01-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  USA San Diego 0.5210496
 79  A*02:01-B*39:05-DRB1*13:02  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 80  A*68:01-B*39:05-DRB1*04:03  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 81  A*68:05-B*39:05-DRB1*04:03  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 82  A*68:01:02-B*39:05-DRB1*14:02-DQB1*03:01  Peru Titikaka Lake Uros 0.4800105
 83  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.46501,999
 84  A*24:02-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 85  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 86  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*03:01  Mexico Chiapas Lacandon Mayans 0.4587218
 87  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 88  A*68:03-B*39:05-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 89  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 90  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:11:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 91  A*02:11:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 92  A*24:02:01-B*39:05:01-C*07:02:01-DRB1*08:02:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 93  A*68:03:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 94  B*39:05-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.4300234
 95  A*02:01-B*39:05-C*07:02-DRB1*14:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.4274234
 96  A*02:01-B*39:05-C*07:02-DRB1*16:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.4274234
 97  A*24:02-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4274234
 98  A*24:02-B*39:05  USA Hispanic pop 2 0.41001,999
 99  A*01:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 100  A*02:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 305) records   Pages: 1 2 3 4 of 4  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

support@allelefrequencies.net

Valid XHTML 1.0 Transitional