Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 657) records   Pages: 1 2 3 4 5 6 7 of 7  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*39:06-C*07:02  Mexico Oaxaca Mixtec 7.0000103
 2  B*39:06-C*07:02  Mexico Mexico City Mestizo pop 2 5.7600234
 3  B*39:06-C*07:02  Mexico Oaxaca Zapotec 4.400090
 4  B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo pop 2 3.4200234
 5  A*24:02-B*39:06-DRB1*14:06  Mexico Oaxaca Mixtec 3.0000103
 6  A*31:01-B*39:06-DRB1*14:06  Mexico Oaxaca Mixtec 3.0000103
 7  B*39:06-C*07:02  Mexico Mexico City Mestizo population 2.7972143
 8  A*24:02-B*39:06-DRB1*16:02  Mexico Mixtec 2.600097
 9  A*24:02-B*39:06-DRB1*16:02  Mexico Oaxaca Jamiltepec Mixtec 2.600096
 10  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo pop 2 2.5600234
 11  A*24:02-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.238867
 12  B*39:06-C*03:05  Mexico Oaxaca Mixtec 2.0000103
 13  B*39:06-C*07:02  USA Hispanic pop 2 1.98201,999
 14  B*39:06-C*07:02  USA Hispanic 1.7000234
 15  A*31:01-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 1.6667150
 16  A*24:02-B*39:06  Brazil Belo Horizonte Caucasian 1.600095
 17  B*39:06-C*07:02  USA North American Native 1.6000187
 18  A*02:01-B*39:06-DRB1*14:06  Mexico Oaxaca Jamiltepec Mixtec 1.560096
 19  A*24:02:01-B*39:06:02  Mexico Guadalajara Mestizo pop 2 1.5000103
 20  A*24:02-B*39:06-C*07:02-DRB1*14:06  USA Mexican American Mestizo 1.5000553
 21  B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo population 1.3986143
 22  A*24:02-B*39:06  USA Hispanic 1.3000234
 23  A*24:02-B*39:06-C*07:02  USA Hispanic 1.3000234
 24  A*31:01-B*39:06  Oman 1.3000118
 25  A*32:01-B*39:06-DRB1*08:01  Azores Oriental Islands 1.300043
 26  A*24:02-B*39:06  USA Hispanic pop 2 1.23701,999
 27  A*24-B*39:06-DRB1*03:01  Tunisia pop 3 1.2000104
 28  A*26:01-B*39:06:02-DRB1*08:01:01  Portugal North 1.100046
 29  A*24:02-B*39:06-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 30  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP Mexican or Chicano 1.0097261,235
 31  A*11:01:01-B*39:06:02-DRB1*16:01:01  Portugal Center 1.000050
 32  A*24:02:01-B*39:06:02-C*07:02:01  South African Mixed ancestry 1.000050
 33  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.8600234
 34  A*01:01-B*39:06-DRB1*04:03-DQB1*03:02  Chile Mapuche 0.770066
 35  A*02:01-B*39:06-DRB1*16:02-DQB1*03:01  Chile Mapuche 0.770066
 36  A*68:01-B*39:06-DRB1*04:03-DQB1*03:02  Chile Mapuche 0.770066
 37  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*05:03-DQB1*03:01  Mexico Tixcacaltuyub Maya 0.746367
 38  A*68:01-B*39:06-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 39  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo population 0.6993143
 40  A*31:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo population 0.6993143
 41  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 42  A*24:02:01-B*39:06:01-C*07:01:01-DRB1*14:06:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 43  A*31:01:02-B*39:06:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 44  A*24:02-B*39:06-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.6881218
 45  A*24:02:01-B*39:06:02-C*07:02:01-DRB1*03:01  Nicaragua Mestizo (G) 0.6452155
 46  A*24:02-B*39:06-DRB1*14:06-DQB1*03:01  Mexico Mexico City Tlalpan 0.6061330
 47  A*02:01-B*39:06-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 48  A*02:01:01-B*39:06:02-C*04:01:01-DRB1*01:01:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*04:02:01  Brazil Rio de Janeiro Parda 0.5882170
 49  A*02:01:01-B*39:06:02-C*12:03:01-DRB1*16:01:01-DQB1*05:02:01-DPA1*01:03:01-DPB1*17:01:01  Brazil Rio de Janeiro Parda 0.5882170
 50  A*02:01-B*39:06-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 51  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.53701,999
 52  A*24:02-B*39:06-DRB1*14:06  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 53  A*68:01-B*39:06-DRB1*14:06  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 54  A*24:02-B*39:06-C*07:02-DRB1*08:01  Russia Bering Island Aleuts 0.4808104
 55  A*24:02-B*39:06-DRB1*03:01  New Zealand Maori with Admixed History 0.4762105
 56  A*24:02-B*39:06-DRB1*09:01  New Zealand Maori with Admixed History 0.4762105
 57  A*29:02-B*39:06-C*07:02-E*01:03:02-F*01:01:01-G*01:01-DRB1*08:01-DQA1*04:01-DQB1*04:02  Portugal Azores Terceira Island 0.4386130
 58  B*39:06-C*07:02-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4300234
 59  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4274234
 60  B*39:06-C*04:01  Mexico Mexico City Mestizo pop 2 0.4200234
 61  A*31:01:02-B*39:06:01-C*07:02:01-DRB1*08:04:01  Costa Rica Amerindians (G) 0.4032125
 62  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP Hispanic South or Central American 0.4026146,714
 63  A*24:02:01-B*39:06:02-C*07:02:01  England Blood Donors of Mixed Ethnicity 0.3790519
 64  A*02:01-B*39:06-C*07:02-DRB1*08:01  Italy pop 5 0.3600975
 65  A*03:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 66  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 67  A*24:02-B*39:06-C*07:02-DRB1*04:08-DQB1*03:01  Mexico Mexico City Mestizo population 0.3497143
 68  A*24:02-B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 69  B*39:06-C*07:02-DRB1*04:08-DQB1*03:01  Mexico Mexico City Mestizo population 0.3497143
 70  B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 71  A*23:01-B*39:06-C*04:01-DRB1*11:01  Brazil Vale do Ribeira Quilombos 0.3472144
 72  A*02:01-B*39:06  USA Hispanic pop 2 0.34001,999
 73  A*01:01-B*39:06-C*07:02-DRB1*03:01-DQA1*05:01-DQB1*03:01  Brazil Puyanawa 0.3333150
 74  A*03:01:01-B*39:06:02-C*12:02:02-DRB1*15:02-DQA1*04:01:01-DQB1*04:02:01-DPA1*01:03:01-DPB1*04:01:01  Russia Belgorod region 0.3268153
 75  A*25:01:01-B*39:06:02-C*07:02:01-DRB1*15:01:01-DQA1*01:02:01-DQB1*06:02-DPA1*01:03:01-DPB1*03:01  Russia Belgorod region 0.3268153
 76  A*02:06:01-B*39:06:02-C*07:02:01-DRB1*14:06:01  Nicaragua Mestizo (G) 0.3226155
 77  A*24:02:01-B*39:06:02-C*07:02:01-DRB1*04:02:01  Nicaragua Mestizo (G) 0.3226155
 78  A*23:01:01-B*39:06:02-C*05:01:01-DRB1*11:04:01-DQB1*06:02:01-DPA1*01:03:01-DPB1*01:01:01  Brazil Barra Mansa Rio State Caucasian 0.3125405
 79  A*24:02:01-B*39:06:02-C*07:02:01-DRB1*14:54:01-DQB1*05:03:01-DPA1*01:03:01-DPB1*10:01:01  Brazil Barra Mansa Rio State Caucasian 0.3125405
 80  A*33:01:01-B*39:06:02-C*08:02:01-DRB1*13:01:01-DQB1*04:02:01-DPA1*01:03:01-DPB1*04:01:01  Brazil Barra Mansa Rio State Caucasian 0.3125405
 81  B*39:06-DRB1*08:01  Italy pop 5 0.3100975
 82  A*24:02-B*39:06-DRB1*14:02-DQB1*03:01  Mexico Mexico City Tlalpan 0.3030330
 83  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:01  USA San Diego 0.2600496
 84  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*01:02-DQB1*06:02-DPB1*03:01  USA San Diego 0.2600496
 85  A*24:02-B*39:06-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPB1*04:01  USA San Diego 0.2600496
 86  A*02:01-B*39:06-DRB1*08:01  Israel USA Jews 0.25906,058
 87  B*39:06-C*07:02  Italy pop 5 0.2500975
 88  A*24:02-B*39:06-C*07:02-DRB1*04:04-DQB1*03:02  USA Hispanic pop 2 0.23401,999
 89  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 90  A*24:02-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 91  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 92  A*33:01:01-B*39:06:02-C*07:02:01-DRB1*16:01:01-DQB1*06:03  Costa Rica Central Valley Mestizo (G) 0.2262221
 93  A*24:02-B*39:06-C*02:02-DRB1*01:03-DQA1*01:01-DQB1*05:02-DPB1*01:01  Nicaragua Managua 0.2165339
 94  A*29:02-B*39:06-C*06:02-DRB1*01:02-DQA1*05:01-DQB1*05:01-DPB1*02:01  Nicaragua Managua 0.2165339
 95  A*02:01-B*39:06-C*07:02  Italy pop 5 0.2100975
 96  B*39:06-C*03:04  Mexico Mexico City Mestizo pop 2 0.2100234
 97  B*39:06-C*03:05  Mexico Mexico City Mestizo pop 2 0.2100234
 98  B*39:06-C*07:01  Mexico Mexico City Mestizo pop 2 0.2100234
 99  A*32:01-B*39:06:02-C*04:01-DRB1*07:01:01-DQB1*02:01  England North West 0.2000298
 100  A*24:02:01-B*39:06:02-C*06:02:01-DRB1*07:01:01-DQB1*04:02:01-DPA1*01:03:01-DPB1*04:02:01  Brazil Rio de Janeiro Caucasian 0.1946521

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 657) records   Pages: 1 2 3 4 5 6 7 of 7  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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