Line |
Haplotype |
Population |
Frequency (%) |
Sample Size |
Distribution¹ |
1 | B*39:08-C*07:02 |  | Mexico Oaxaca Zapotec | 2.2000 |  | 90 |
 |
2 | A*68:03-B*39:08-DRB1*08:02 |  | Mexico Mixtec | 2.1000 |  | 97 |
 |
3 | A*68:03-B*39:08-DRB1*08:02 |  | Mexico Oaxaca Jamiltepec Mixtec | 2.0800 |  | 96 |
 |
4 | A*02:01:01-B*39:08-C*07:02:01-DRB1*04:07 |  | Costa Rica Amerindians (G) | 1.9962 |  | 125 |
 |
5 | B*39:08-C*07:02 |  | Mexico Oaxaca Mixtec | 1.0000 |  | 103 |
 |
6 | A*68:07-B*39:08-C*07:02:01-DRB1*14:02-DQB1*03:01 |  | Costa Rica Central Valley Mestizo (G) | 0.9050 |  | 221 |
 |
7 | B*39:08-C*07:02 |  | Mexico Mexico City Mestizo pop 2 | 0.6400 |  | 234 |
 |
8 | A*68:01-B*39:08-DRB1*08:02 |  | Mexico Oaxaca Jamiltepec Mixtec | 0.5200 |  | 96 |
 |
9 | A*02:06-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 |  | Mexico Chiapas Lacandon Mayans | 0.4587 |  | 218 |
 |
10 | A*68:01:02-B*39:08-C*07:02:01-DRB1*08:02:01-DQB1*04:02:01 |  | Costa Rica Central Valley Mestizo (G) | 0.4525 |  | 221 |
 |
11 | A*68:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02 |  | Nicaragua Managua | 0.4329 |  | 339 |
 |
12 | B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 |  | Mexico Mexico City Mestizo pop 2 | 0.4300 |  | 234 |
 |
13 | A*24:02:01-B*39:08-C*03:04:01-DRB1*08:02:01 |  | Costa Rica Amerindians (G) | 0.4080 |  | 125 |
 |
14 | A*68:03-B*39:08-C*07:17-DRB1*08:02-DQB1*04:02 |  | Mexico Mexico City Mestizo population | 0.3497 |  | 143 |
 |
15 | B*39:08-C*07:17 |  | Mexico Mexico City Mestizo population | 0.3497 |  | 143 |
 |
16 | B*39:08-C*07:17-DRB1*08:02-DQB1*04:02 |  | Mexico Mexico City Mestizo population | 0.3497 |  | 143 |
 |
17 | A*02:01:01-B*39:08-C*07:02:01-DRB1*01:02:01 |  | Nicaragua Mestizo (G) | 0.3226 |  | 155 |
 |
18 | A*02:01:01-B*39:08-C*07:02:01-DRB1*14:06:01 |  | Nicaragua Mestizo (G) | 0.3226 |  | 155 |
 |
19 | A*02:05:01-B*39:08-C*07:02:01-DRB1*08:02:01 |  | Nicaragua Mestizo (G) | 0.3226 |  | 155 |
 |
20 | A*30:02:01-B*39:08-C*07:01:01-DRB1*08:02:01 |  | Nicaragua Mestizo (G) | 0.3226 |  | 155 |
 |
21 | A*30:02:01-B*39:08-C*07:02:01-DRB1*14:06:01 |  | Nicaragua Mestizo (G) | 0.3226 |  | 155 |
 |
22 | A*31:01:02-B*39:08-C*07:02:01-DRB1*04:07 |  | Nicaragua Mestizo (G) | 0.3226 |  | 155 |
 |
23 | A*68:07-B*39:08-C*07:02:01-DRB1*09:01:02 |  | Nicaragua Mestizo (G) | 0.3226 |  | 155 |
 |
24 | A*02:06-B*39:08-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02 |  | Mexico Chiapas Lacandon Mayans | 0.2294 |  | 218 |
 |
25 | A*24:02-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 |  | Mexico Chiapas Lacandon Mayans | 0.2294 |  | 218 |
 |
26 | A*24:02-B*39:08-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02 |  | Mexico Chiapas Lacandon Mayans | 0.2294 |  | 218 |
 |
27 | A*31:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:03-DQB1*03:02-DPA1*01:03-DPB1*04:02 |  | Mexico Chiapas Lacandon Mayans | 0.2294 |  | 218 |
 |
28 | A*02:01:01-B*39:08-C*07:02:01-DRB1*04:10:01-DQB1*04:02:01 |  | Costa Rica Central Valley Mestizo (G) | 0.2262 |  | 221 |
 |
29 | A*02:01:01-B*39:08-C*07:02:01-DRB1*13:02:01-DQB1*06:04 |  | Costa Rica Central Valley Mestizo (G) | 0.2262 |  | 221 |
 |
30 | A*24:02:01-B*39:08-C*07:02:01-DRB1*04:10:01-DQB1*04:02:01 |  | Costa Rica Central Valley Mestizo (G) | 0.2262 |  | 221 |
 |
31 | A*30:02:01-B*39:08-C*04:01:01-DRB1*01:02:01-DQB1*05:01 |  | Costa Rica Central Valley Mestizo (G) | 0.2262 |  | 221 |
 |
32 | A*03:01-B*39:08-C*07:02-DRB1*04:05-DQA1*03:01-DQB1*04:02-DPB1*04:02 |  | Nicaragua Managua | 0.2165 |  | 339 |
 |
33 | A*68:01-B*39:08-C*07:02-DRB1*04:01-DQA1*03:01-DQB1*03:02-DPB1*04:02 |  | Nicaragua Managua | 0.2165 |  | 339 |
 |
34 | A*68:03-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02 |  | Nicaragua Managua | 0.2165 |  | 339 |
 |
35 | A*68:03-B*39:08-C*07:17-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPB1*03:01 |  | Nicaragua Managua | 0.2165 |  | 339 |
 |
36 | A*68:07-B*39:08-C*07:02-DRB1*01:02-DQA1*05:01-DQB1*05:01-DPB1*04:02 |  | Nicaragua Managua | 0.2165 |  | 339 |
 |
37 | A*02:06-B*39:08-C*15:02-DRB1*16:11-DQB1*03:01-DPB1*04:02 |  | Panama | 0.1900 |  | 462 |
 |
38 | A*23:01-B*39:08-C*02:10-DRB1*04:01-DQB1*04:02-DPB1*04:01 |  | Panama | 0.1900 |  | 462 |
 |
39 | A*24:02-B*39:08-C*07:02-DRB1*04:05-DQB1*04:02-DPB1*14:01 |  | Panama | 0.1900 |  | 462 |
 |
40 | A*31:01-B*39:08-C*04:01-DRB1*04:10-DQB1*04:02-DPB1*14:01 |  | Panama | 0.1900 |  | 462 |
 |
41 | B*39:08-C*07:02 |  | USA Hispanic pop 2 | 0.1760 |  | 1,999 |
 |
42 | A*02:01:01-B*39:08-C*07:02:01-DRB1*08:02:01 |  | Costa Rica Amerindians (G) | 0.1116 |  | 125 |
 |
43 | A*02:01-B*39:08 |  | USA Hispanic pop 2 | 0.1010 |  | 1,999 |
 |
44 | A*68:05-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 |  | USA Hispanic pop 2 | 0.0940 |  | 1,999 |
 |
45 | A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*05:01 |  | Costa Rica Central Valley Mestizo (G) | 0.0911 |  | 221 |
 |
46 | A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*06:02 |  | Costa Rica Central Valley Mestizo (G) | 0.0876 |  | 221 |
 |
47 | A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*06:03 |  | Costa Rica Central Valley Mestizo (G) | 0.0766 |  | 221 |
 |
48 | A*68:05-B*39:08 |  | USA Hispanic pop 2 | 0.0760 |  | 1,999 |
 |
49 | A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*03:02 |  | Costa Rica Central Valley Mestizo (G) | 0.0723 |  | 221 |
 |
50 | A*24:14-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01 |  | Colombia Bogotá Cord Blood | 0.0684 |  | 1,463 |
 |
51 | A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*06:02 |  | Costa Rica Central Valley Mestizo (G) | 0.0628 |  | 221 |
 |
52 | A*24:02-B*39:08-C*07:02-DRB1*04:10-DQB1*04:02 |  | Colombia Bogotá Cord Blood | 0.0567 |  | 1,463 |
 |
53 | A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*03:01 |  | Costa Rica Central Valley Mestizo (G) | 0.0511 |  | 221 |
 |
54 | B*39:08-C*07:17 |  | USA Hispanic pop 2 | 0.0500 |  | 1,999 |
 |
55 | A*02:01-B*39:08-C*07:02-DRB1*04:04-DQB1*03:02 |  | USA Hispanic pop 2 | 0.0470 |  | 1,999 |
 |
56 | A*02:01-B*39:08-C*07:17-DRB1*04:10-DQB1*04:02 |  | USA Hispanic pop 2 | 0.0470 |  | 1,999 |
 |
57 | A*68:03-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 |  | USA Hispanic pop 2 | 0.0470 |  | 1,999 |
 |
58 | A*68:07-B*39:08-C*07:02-DRB1*04:03-DQB1*03:02 |  | USA Hispanic pop 2 | 0.0470 |  | 1,999 |
 |
59 | A*24:14-B*39:08-C*07:02-DRB1*04:10-DQB1*04:02 |  | Colombia Bogotá Cord Blood | 0.0458 |  | 1,463 |
 |
60 | A*02:01-B*39:08-C*07:02-DRB1*16:02-DQB1*03:01 |  | Colombia Bogotá Cord Blood | 0.0342 |  | 1,463 |
 |
61 | A*02:22-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 |  | Colombia Bogotá Cord Blood | 0.0342 |  | 1,463 |
 |
62 | A*02:22-B*39:08-C*07:02-DRB1*11:01-DQB1*03:01 |  | Colombia Bogotá Cord Blood | 0.0342 |  | 1,463 |
 |
63 | A*24:14-B*39:08-C*07:02-DRB1*08:02-DQB1*04:02 |  | Colombia Bogotá Cord Blood | 0.0342 |  | 1,463 |
 |
64 | A*32:01-B*39:08-C*07:02-DRB1*04:05-DQB1*04:02 |  | Colombia Bogotá Cord Blood | 0.0342 |  | 1,463 |
 |
65 | A*33:03-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01 |  | Colombia Bogotá Cord Blood | 0.0342 |  | 1,463 |
 |
66 | A*68:01-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 |  | Colombia Bogotá Cord Blood | 0.0342 |  | 1,463 |
 |
67 | A*68:03-B*39:08 |  | USA Hispanic pop 2 | 0.0250 |  | 1,999 |
 |
68 | A*68:07-B*39:08 |  | USA Hispanic pop 2 | 0.0250 |  | 1,999 |
 |
69 | A*02:01-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 |  | USA Hispanic pop 2 | 0.0230 |  | 1,999 |
 |
70 | A*02:01-B*39:08-C*07:02-DRB1*04:11-DQB1*04:02 |  | USA Hispanic pop 2 | 0.0230 |  | 1,999 |
 |
71 | A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*05:01 |  | Costa Rica Central Valley Mestizo (G) | 0.0109 |  | 221 |
 |
* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).