Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

Please specify your search by selecting options from boxes. Then, click "Search" to find HLA Haplotype frequencies that match your criteria. Remember at least one option must be selected.
A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 31 (from 31) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:01-B*40:11-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 2  A*29:02-B*40:11-C*16:01-DRB1*07:01-DQB1*02:02  Colombia North Wiwa El Encanto 0.961552
 3  B*40:11-C*03:04  Mexico Mexico City Mestizo population 0.6993143
 4  B*40:11-C*03:04-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.6993143
 5  A*02:06-B*40:11-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 6  A*32:01:01-B*40:119-C*02:02:02-DRB1*16:02:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 7  A*02:06:01-B*40:11:01-C*01:02:01-DRB1*14:02  Costa Rica Amerindians (G) 0.4032125
 8  A*31-B*40:11-DRB1*04-DQB1*03:02  Mexico Tabasco Rural 0.3521142
 9  A*01:01-B*40:11-C*03:04-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 10  A*68:01-B*40:11-C*03:04-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 11  A*31:01:02-B*40:11:01-C*03:04:01-DRB1*04:10:01  Nicaragua Mestizo (G) 0.3226155
 12  A*02:01-B*40:11-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 13  A*24:02-B*40:11-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 14  A*02:01:01-B*40:11:01-C*07:01:01-DRB1*11:04:01-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.2262221
 15  B*40:11-C*03:04  USA Hispanic pop 2 0.20101,999
 16  A*02:01-B*40:11-C*07:02-DRB1*08:02-DQB1*03:02-DPB1*04:02  Panama 0.1900462
 17  A*31:01-B*40:11  USA Hispanic pop 2 0.10101,999
 18  A*24:02-B*40:11-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.09401,999
 19  A*02:01:01-B*40:11:01-C*03:05-DRB1*04:07-DQB1*06:03  Costa Rica Central Valley Mestizo (G) 0.0673221
 20  A*02:01:01-B*40:11:01-C*03:05-DRB1*04:07-DQB1*02:01  Costa Rica Central Valley Mestizo (G) 0.0646221
 21  A*02:06-B*40:11  USA Hispanic pop 2 0.05001,999
 22  A*68:01-B*40:11  USA Hispanic pop 2 0.04801,999
 23  A*02:01:01-B*40:11:01-C*03:05-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.0404221
 24  A*02:01:01-B*40:11:01-C*03:05-DRB1*04:07-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.0404221
 25  A*02:13-B*40:11-C*03:04-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03421,463
 26  A*31:01-B*40:11-C*03:04-DRB1*04:03-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 27  A*31:01-B*40:11-C*14:02-DRB1*15:02-DQB1*06:01  Colombia Bogotá Cord Blood 0.03421,463
 28  A*24:02-B*40:11  USA Hispanic pop 2 0.02801,999
 29  B*40:11-C*07:02  USA Hispanic pop 2 0.02501,999
 30  A*02:01:01-B*40:11:01-C*03:05-DRB1*04:07-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 0.0135221
 31  A*26:01-B*40:11-C*03:04-DRB1*09:01  Japan pop 16 0.005018,604

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

support@allelefrequencies.net


Valid XHTML 1.0 Transitional