Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 100 (from 323) records   Pages: 1 2 3 4 of 4  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68-B*39-DRB1*08-DQB1*04  Mexico Tamaulipas, Ciudad Victoria 8.695723
 2  A*68:01-B*39:09-DRB1*08:02-DQB1*04:02  Chile Mapuche 6.150066
 3  A*02-B*39-DRB1*08-DQB1*04  Mexico Baja California, Tijuana 4.000025
 4  A*02-B*39-DRB1*08-DQB1*04  Mexico Baja California Rural 4.000050
 5  A*02-B*39-DRB1*08-DQB1*04  Mexico Guanajuato, Leon 3.846278
 6  A*02-B*39-DRB1*08:02-DQB1*04:02  Bolivia La Paz Aymaras 3.426087
 7  A*24-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Poza Rica 3.333345
 8  A*68-B*39-DRB1*08-DQB1*04  Mexico Yucatan Rural 2.9851132
 9  A*31-B*39-DRB1*08-DQB1*04  Mexico Mexico City South 2.884652
 10  A*68-B*39-DRB1*08-DQB1*04  Mexico Mexico City South 2.884652
 11  A*24-B*39-DRB1*08-DQB1*04  Mexico Hidalgo, Pachuca 2.439041
 12  A*02-B*39-DRB1*08-DQB1*04  Mexico Zacatecas, Zacatecas city 2.381084
 13  A*24-B*39-DRB1*08-DQB1*04  Mexico Tamaulipas Rural 2.3810125
 14  A*24-B*39-DRB1*08-DQB1*04  Mexico Queretaro, Queretaro city 2.222245
 15  A*02:01-B*39:01-DRB1*08:11-DQB1*04:02  USA South Dakota Lakota Sioux 2.2000302
 16  A*68-B*39-DRB1*08-DQB1*04  Mexico Quintana Roo, Cancun 2.083348
 17  B*39-C*07-DRB1*08-DQA1*04-DQB1*04  Mexico Tapachula, Chiapas Mestizo Population 2.083372
 18  A*24-B*39-DRB1*08-DQB1*04  Mexico Sonora, Hermosillo 2.020299
 19  A*24-B*39-DRB1*08-DQB1*04  Mexico Baja California, Tijuana 2.000025
 20  A*68-B*39-DRB1*08-DQB1*04  Mexico Quintana Roo Rural 2.000050
 21  A*02-B*39-DRB1*08-DQB1*04  Mexico Oaxaca, Oaxaca city 1.9868151
 22  A*68-B*39-DRB1*08-DQB1*04  Mexico Zacatecas, Fresnillo 1.9048103
 23  A*68-B*39-DRB1*08-DQB1*04  Mexico Mexico City East 1.875079
 24  A*68-B*39-DRB1*08-DQB1*04  Mexico Guanajuato Rural 1.8405162
 25  A*24-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Coatzacoalcos 1.785755
 26  A*68-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Cordoba 1.785756
 27  A*68-B*39-DRB1*08-DQB1*04  Mexico Puebla Rural 1.7386833
 28  A*02-B*39-DRB1*08-DQB1*04  Mexico Jalisco, Tlajomulco 1.666730
 29  A*24-B*39-DRB1*08-DQB1*04  Mexico Morelos Rural 1.666730
 30  A*68-B*39-DRB1*08-DQB1*04  Mexico Colima, Colima city 1.639361
 31  A*02-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Xalapa 1.6043187
 32  A*02-B*39-DRB1*08-DQB1*04  Mexico Oaxaca Rural 1.5400485
 33  A*68-B*39-DRB1*08-DQB1*04  Mexico Yucatan, Merida 1.5385192
 34  A*68:01-B*39:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Tlalpan 1.5152330
 35  A*24-B*39-DRB1*08-DQB1*04  Mexico Mexico City West 1.470633
 36  A*31-B*39-DRB1*08-DQB1*04  Mexico Mexico City West 1.470633
 37  A*68-B*39-DRB1*08-DQB1*04  Mexico Mexico City West 1.470633
 38  A*02-B*39-DRB1*08-DQB1*04  Mexico Jalisco, Tonala 1.428635
 39  A*68-B*39-DRB1*08-DQB1*04  Mexico Jalisco, Tonala 1.428635
 40  B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 1.3986143
 41  A*68-B*39-C*07-DRB1*08-DQA1*04-DQB1*04  Mexico Tapachula, Chiapas Mestizo Population 1.388972
 42  A*24-B*39-DRB1*08-DQA1*04:01-DQB1*04:02  Georgia Svaneti Region Svan 1.300080
 43  A*24-B*39-DRB1*08-DQB1*04  Ecuador Amazonia Mixed Ancestry 1.282139
 44  A*31-B*39-DRB1*08-DQB1*04  Mexico Jalisco, Tlaquepaque 1.282139
 45  A*31-B*39-DRB1*08:02-DQB1*04:02  Bolivia La Paz Aymaras 1.241087
 46  A*02-B*39-DRB1*08-DQB1*04  Mexico Chiapas Rural 1.2397121
 47  A*24-B*39-DRB1*08-DQB1*04  Mexico Chiapas Rural 1.2397121
 48  A*31:01-B*39:01-DRB1*08:02-DQB1*04:02  Mexico Veracruz Xalapa 1.190584
 49  A*02-B*39-DRB1*08-DQB1*04  Guatemala, Guatemala City Mixed Ancestry 1.1800127
 50  A*02-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Veracruz city 1.1628171
 51  A*02-B*39-DRB1*08-DQB1*04  Mexico Coahuila Rural 1.1468216
 52  A*68-B*39-DRB1*08-DQB1*04  Mexico Tlaxcala Rural 1.1446830
 53  A*24-B*39-DRB1*08-DQB1*04  Mexico Puebla Rural 1.1391833
 54  A*24-B*39-DRB1*08-DQB1*04  Mexico Colima Rural 1.136443
 55  A*24-B*39-DRB1*08-DQB1*04  Mexico Oaxaca Rural 1.1294485
 56  A*68-B*39-DRB1*08-DQB1*04  Mexico Oaxaca Rural 1.1294485
 57  A*31-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Poza Rica 1.111145
 58  A*68-B*39-DRB1*08-DQB1*04  Mexico Queretaro, Queretaro city 1.111145
 59  A*24-B*39-DRB1*08-DQB1*04  Mexico Tlaxcala, Tlaxcala city 1.1050181
 60  B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 1.0700234
 61  A*68:01-B*39:05-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*04:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 62  A*24:03-B*39:04-C*07:27-DRB1*08:04-DQB1*04:02  Colombia North Chimila Amerindians 1.063847
 63  A*24:03-B*39:09-C*07:05-DRB1*08:04-DQB1*04:02  Colombia North Chimila Amerindians 1.063847
 64  A*24-B*39-DRB1*08-DQB1*04  Mexico Campeche Rural 1.063847
 65  A*31:01-B*39:13-C*17:01-DRB1*08:07-DQB1*04:02  Colombia North Chimila Amerindians 1.063847
 66  A*02-B*39-DRB1*08-DQB1*04  Mexico Aguascalientes state 1.052695
 67  A*24-B*39-DRB1*08-DQB1*04  Mexico Guerrero state 1.0417144
 68  A*02-B*39-DRB1*08-DQB1*04  Mexico Tlaxcala Rural 1.0241830
 69  A*02-B*39-DRB1*08-DQB1*04  Mexico Puebla Rural 1.0192833
 70  A*68-B*39-DRB1*08-DQB1*04  Mexico Puebla, Puebla city 1.00201,994
 71  A*68-B*39-DRB1*08-DQB1*04  Mexico Mexico City Center 0.9740152
 72  A*02-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Cordoba 0.892956
 73  A*24-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Cordoba 0.892956
 74  A*32-B*39-DRB1*08-DQA1*04-DQB1*04  Russia, South Ural, Chelyabinsk region, Nagaybaks 0.8900112
 75  A*24-B*39-DRB1*08-DQB1*04  Mexico Nuevo Leon, Monterrey city 0.8850226
 76  A*02-B*39-DRB1*08-DQB1*04  Mexico Coahuila, Torreon 0.8750396
 77  A*24-B*39-DRB1*08-DQB1*04  Mexico Mexico City North 0.8632751
 78  A*02-B*39-DRB1*08:02-DQB1*04:02  Bolivia Quechua 0.860069
 79  A*02-B*39-DRB1*08-DQB1*04  Mexico Michoacan Rural 0.8596348
 80  A*24-B*39-DRB1*08-DQB1*04  Mexico Michoacan Rural 0.8596348
 81  A*68-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Orizaba 0.833360
 82  A*02-B*39-DRB1*08-DQB1*04  Mexico Puebla, Puebla city 0.82671,994
 83  A*24-B*39-DRB1*08-DQB1*04  Mexico Veracruz, Xalapa 0.8021187
 84  A*02-B*39-DRB1*08-DQB1*04  Mexico Mexico City North 0.7968751
 85  A*02-B*39-DRB1*08-DQB1*04  Mexico Tamaulipas Rural 0.7937125
 86  A*68-B*39-DRB1*08-DQB1*04  Mexico Tamaulipas Rural 0.7937125
 87  A*02-B*39-DRB1*08-DQB1*04  Ecuador Andes Mixed Ancestry 0.7888824
 88  A*02-B*39-DRB1*08-DQB1*04  Mexico Nayarit Rural 0.781264
 89  A*24-B*39-DRB1*08-DQB1*04  Mexico Puebla, Puebla city 0.77661,994
 90  A*02:01-B*39:01-DRB1*08:02-DQB1*04:02  Chile Mapuche 0.770066
 91  A*33:01-B*39:01-DRB1*08:02-DQB1*04:02  Chile Mapuche 0.770066
 92  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02  Mexico Tixcacaltuyub Maya 0.746367
 93  A*01:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 94  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 95  A*02-B*39-DRB1*08-DQB1*04  Mexico Guerrero state 0.6944144
 96  A*24:02:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 97  A*24:02:01-B*39:01:01-C*08:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 98  A*25-B*39-C*07-DRB1*08-DQA1*04-DQB1*04  Mexico Tapachula, Chiapas Mestizo Population 0.694472
 99  A*31:01:02-B*39:06:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 100  A*68:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 323) records   Pages: 1 2 3 4 of 4  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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