Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 40 (from 40) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*31:01-B*39:01-C*08:03-DRB1*16:02-DQA1*05:05-DQB1*03:01  Brazil Puyanawa 5.9180150
 2  A*02:06-B*39:01-DRB1*16:02  Mexico Oaxaca Mixtec 3.0000103
 3  A*11:02-B*39:01-DRB1*16:02  China Guangxi Region Maonan 2.3000108
 4  A*31:01-B*39:01-C*08:01-DRB1*16:02-DQA1*05:05-DQB1*03:01  Brazil Puyanawa 1.7486150
 5  A*24:02-B*39:01-DRB1*16:02-DQB1*03:01  Chile Mapuche 1.540066
 6  A*02:01-B*39:01-DRB1*16:02:01-DQB1*03:01  USA South Dakota Lakota Sioux 1.4000302
 7  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*16:02:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 8  A*68:01:01-B*39:01:01-C*07:01:01-DRB1*16:02:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 9  A*24:02-B*39:01-DRB1*16:02-DQB1*03:01  Mexico Veracruz Xalapa 0.595284
 10  A*36-B*39:01-DRB1*16:02-DQB1*03:01  Mexico Veracruz Xalapa 0.595284
 11  A*68:01-B*39:01-DRB1*16:02-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 12  A*31:01-B*39:01-C*08:03-DRB1*16:02-DQA1*05:05-DQB1*03:02  Brazil Puyanawa 0.3333150
 13  A*68:01-B*39:01-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01  Brazil Puyanawa 0.3333150
 14  A*68:01-B*39:01-C*08:03-DRB1*16:02-DQA1*05:05-DQB1*03:01  Brazil Puyanawa 0.3333150
 15  A*26:01-B*39:01-C*03:04-DRB1*16:02-DQB1*05:02  Malaysia Peninsular Chinese 0.2577194
 16  A*26:01-B*39:01-C*12:03-DRB1*16:02  Italy pop 5 0.1000975
 17  A*01:01-B*39:01-C*07:02-DRB1*16:02-DQB1*03:01  USA Hispanic pop 2 0.04701,999
 18  A*02:01-B*39:01-C*07:02-DRB1*16:02-DQB1*03:01  USA Hispanic pop 2 0.04701,999
 19  A*24:02-B*39:01-C*07:02-DRB1*16:02-DQB1*05:02  USA Asian pop 2 0.04401,772
 20  A*11:01-B*39:01-DRB1*16:02  Hong Kong Chinese cord blood registry 0.04073,892
 21  A*11:01-B*39:01-C*07:02-DRB1*16:02  Germany DKMS - China minority 0.03901,282
 22  A*11:02-B*39:01-C*07:02-DRB1*16:02  Germany DKMS - China minority 0.03901,282
 23  A*02:03-B*39:01-DRB1*16:02  Hong Kong Chinese cord blood registry 0.03803,892
 24  A*24:02-B*39:01-C*07:02-DRB1*16:02-DQB1*05:02  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 25  A*30:01:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DQB1*05:02:01  China Zhejiang Han 0.02881,734
 26  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02825,266
 27  A*26:01-B*39:01-DRB1*16:02  Hong Kong Chinese cord blood registry 0.02353,892
 28  A*02:01-B*39:01-C*07:02-DRB1*16:02  Hong Kong Chinese BMDR 0.02227,595
 29  A*02:01-B*39:01-DRB1*16:02  Hong Kong Chinese cord blood registry 0.01543,892
 30  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01075,266
 31  A*26:01-B*39:01-C*07:02-DRB1*16:02  Hong Kong Chinese BMDR 0.01027,595
 32  A*03:01-B*39:01-C*12:03-DRB1*16:02-DQB1*05:02  Germany DKMS - Turkey minority 0.01004,856
 33  A*11:01-B*39:01-C*12:03-DRB1*16:02-DQB1*05:02  Germany DKMS - Turkey minority 0.01004,856
 34  A*24:02-B*39:01-C*06:02-DRB1*16:02-DQB1*05:02  Germany DKMS - Turkey minority 0.01004,856
 35  A*02:01:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00945,266
 36  A*26:01-B*39:01-DRB1*16:02  Israel Kavkazi Jews 0.00882,840
 37  A*11:02:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DPB1*13:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00845,266
 38  A*25:01-B*39:01-DRB1*16:02  Israel USA Jews 0.00836,058
 39  A*01:01-B*39:01-DRB1*16:02  Israel Tunisia Jews 0.00559,070
 40  A*02:01-B*39:01-C*07:02-DRB1*16:02  Japan pop 16 0.005018,604

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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