Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 121) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*24:02:01-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 8.2652125
 2  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 6.7860125
 3  A*24:02-B*40:02-DRB1*04:07  Mexico Oaxaca Mixtec 4.0000103
 4  A*31:01-B*40:02-DRB1*04:07  Mexico Oaxaca Mixe 3.000055
 5  A*24:02:01-B*40:02:01-C*03:05-DRB1*04:07  Nicaragua Mestizo (G) 2.2581155
 6  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 1.7316339
 7  A*02:01:01-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 1.6862125
 8  A*02:01-B*40:02-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 1.560096
 9  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 1.492567
 10  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 1.3575221
 11  A*02:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 1.190584
 12  A*68:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 1.190584
 13  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*04:02  Panama 1.1400462
 14  A*24:02:01-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 1.1312221
 15  A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 1.0753125
 16  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 17  A*31:01-B*40:02-C*15:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 18  A*68:01-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 19  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 20  A*68:03-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 21  A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 22  A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07  Nicaragua Mestizo (G) 0.9677155
 23  A*24:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 24  A*24:17-B*40:02-C*01:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 25  A*68:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 26  A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.9091110
 27  A*68:01:02-B*40:02:01-C*03:04:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.9091110
 28  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.8658339
 29  B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.8600234
 30  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.82111,463
 31  A*02:06:01-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 0.8065125
 32  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 33  A*02:01:01-B*40:02:01-C*03:02:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 34  A*24:02:01-B*40:02:01-C*04:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 35  A*68:01:01-B*40:02:01-C*03:02:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 36  A*68:03:01-B*40:02:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 37  A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.6787221
 38  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07  Nicaragua Mestizo (G) 0.6728155
 39  A*02:06:01-B*40:02:01-C*03:05-DRB1*04:07  Nicaragua Mestizo (G) 0.6452155
 40  A*24:02-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 41  A*31:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 42  A*02:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 43  A*68:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 44  A*24:02-B*40:02-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 45  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 46  A*02:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.4545330
 47  A*02:22:01-B*40:02:01-C*03:05-DRB1*04:07-DQB1*02:01  Costa Rica Central Valley Mestizo (G) 0.4525221
 48  A*31:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4274234
 49  A*24:72-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 0.4032125
 50  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*04:01  Panama 0.3800462
 51  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*14:01  Panama 0.3800462
 52  A*32:01:01-B*40:02:01-C*02:02:02-DRB1*04:07:01-DQB1*06:03:01-DPA1*02:01:01-DPB1*17:01:01  Brazil Barra Mansa Rio State Caucasian 0.3125405
 53  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA NMDP Black South or Central American 0.30624,889
 54  A*24:02-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.3030330
 55  A*68:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.3030330
 56  A*24:14-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.30251,463
 57  A*02:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 58  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01  Mexico Chiapas Lacandon Mayans 0.2294218
 59  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 60  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 61  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 62  A*68:05-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 63  A*68:05-B*40:02-C*15:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.2294218
 64  A*68:01:02-B*40:02:01-C*03:04:01-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.2262221
 65  A*02:01-B*40:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 66  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*14:01  Nicaragua Managua 0.2165339
 67  A*31:01-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 68  A*31:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 69  A*68:01-B*40:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 70  A*68:03-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 71  A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 72  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA NMDP Caribean Indian 0.190414,339
 73  A*01:01-B*40:02-C*02:02-DRB1*04:07-DQB1*06:02-DPB1*01:01  Panama 0.1900462
 74  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*105:01  Panama 0.1900462
 75  A*30:04-B*40:02-C*08:02-DRB1*04:07-DQB1*05:01-DPB1*04:02  Panama 0.1900462
 76  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQB1*04:02-DPB1*04:02  Panama 0.1900462
 77  A*68:01-B*40:02-C*12:02-DRB1*04:07-DQB1*03:02-DPB1*02:01  Panama 0.1900462
 78  A*24:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.18301,999
 79  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.17991,463
 80  A*26:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.1515330
 81  A*31:01-B*40:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.1515330
 82  A*68:01-B*40:02-DRB1*04:07-DQB1*02:01  Mexico Mexico City Tlalpan 0.1515330
 83  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.14915,926
 84  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.14001,999
 85  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.14001,999
 86  A*68:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.14001,999
 87  A*24:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.13891,463
 88  A*24:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA NMDP Black South or Central American 0.10984,889
 89  A*02:22-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.10611,463
 90  A*02:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.09801,999
 91  A*24:22-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.09401,999
 92  A*02:01:01-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 0.0880221
 93  A*24:02-B*40:02-C*01:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.06901,463
 94  A*31:01-B*40:02-C*01:10-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.06841,463
 95  A*02:01:01-B*40:02:01-C*03:05-DRB1*04:07-DQB1*02:01  Costa Rica Central Valley Mestizo (G) 0.0628221
 96  A*02:05-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 97  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 98  A*68:01-B*40:02-C*03:04-DRB1*04:07  Germany DKMS - Spain minority 0.04501,107
 99  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA African American pop 4 0.04402,411
 100  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA African American pop 4 0.04402,411

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 121) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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