Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

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Displaying 1 to 100 (from 112) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico San Luis Potosi, San Luis Potosi city 3.333330
 2  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Campeche Rural 3.191547
 3  A*02-B*40:02-DRB1*16-DQB1*03:01  Ecuador Amazonia Mixed Ancestry 2.564139
 4  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Colima Rural 2.272743
 5  A*02:06-B*40:02-DRB1*16:02-DQB1*03:01  USA Alaska Yupik 2.1000252
 6  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico San Luis Potosi, San Luis Potosi city 1.666730
 7  A*24-B*40:02-DRB1*16-DQB1*03:01  Ecuador Amazonia Mixed Ancestry 1.282139
 8  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Queretaro, Queretaro city 1.111145
 9  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Veracruz, Poza Rica 1.111145
 10  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Mexico City South 0.961552
 11  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Chiapas, Tuxtla Gutierrez 0.943452
 12  B*40:02-C*03:04-DRB1*16:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.8600234
 13  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Colima, Colima city 0.819761
 14  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Tamaulipas Rural 0.7937125
 15  A*11-B*40:02-DRB1*16-DQB1*03:01  Mexico Nayarit Rural 0.781264
 16  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Nayarit Rural 0.781264
 17  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Nayarit Rural 0.781264
 18  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Nuevo Leon Rural 0.6818439
 19  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Baja California, La Paz 0.666775
 20  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Guanajuato, Leon 0.641078
 21  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Mexico City East 0.625079
 22  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Tabasco, Villahermosa 0.609882
 23  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Tabasco, Villahermosa 0.609882
 24  A*24:02-B*40:02-DRB1*16:02-DQB1*03:01  Mexico Veracruz Xalapa 0.595284
 25  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Tlaxcala, Tlaxcala city 0.5525181
 26  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Nayarit, Tepic 0.515597
 27  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Baja Californa, Mexicali 0.5000100
 28  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Baja Californa, Mexicali 0.5000100
 29  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Zacatecas, Fresnillo 0.4762103
 30  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Durango Rural 0.4587326
 31  A*24:02-B*40:02-C*05:01-E*01:01:01-F*01:01:02-G*01:04-DRB1*16:01-DQA1*01:02-DQB1*03:01  Portugal Azores Terceira Island 0.4386130
 32  A*02:06-B*40:02-C*03:04-DRB1*16:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.4274234
 33  A*31:01-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.4274234
 34  A*02-B*40:02-DRB1*16-DQB1*03:01  Ecuador Mixed Ancestry 0.42631,173
 35  A*02-B*40:02-DRB1*16-DQB1*03:01  Ecuador Coast Mixed Ancestry 0.4202238
 36  A*24-B*40:02-DRB1*16-DQB1*03:01  Ecuador Coast Mixed Ancestry 0.4202238
 37  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Puebla Rural 0.4197833
 38  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Chiapas Rural 0.4132121
 39  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Tamaulipas Rural 0.3968125
 40  A*02-B*40:02-DRB1*16:02-DQB1*03:01  Guatemala, Guatemala City Mixed Ancestry 0.3900127
 41  A*24-B*40:02-DRB1*16:02-DQB1*03:01  Guatemala, Guatemala City Mixed Ancestry 0.3900127
 42  A*24:02-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01-DPB1*04:02  Panama 0.3800462
 43  A*68:01-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01-DPB1*04:02  Panama 0.3800462
 44  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Puebla, Puebla city 0.37581,994
 45  A*02-B*40:02-DRB1*16-DQB1*03:01  Ecuador Andes Mixed Ancestry 0.3641824
 46  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Puebla Rural 0.3597833
 47  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Tabasco Rural 0.3521142
 48  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Sonora, Ciudad Obregón 0.3497143
 49  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Guerrero state 0.3472144
 50  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Nuevo Leon Rural 0.3409439
 51  A*31:01-B*40:02-C*03:04-DRB1*16:02-DQA1*05:05-DQB1*03:01  Brazil Puyanawa 0.3333150
 52  A*68:01-B*40:02-C*03:04-DRB1*16:02-DQA1*05:10-DQB1*03:01  Brazil Puyanawa 0.3333150
 53  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Mexico City Metropolitan Area Rural 0.3289150
 54  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Mexico City Center 0.3247152
 55  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Durango, Durango city 0.3226153
 56  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Oaxaca Rural 0.3080485
 57  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Guanajuato Rural 0.3067162
 58  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Tlaxcala Rural 0.3012830
 59  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Sinaloa Rural 0.2732183
 60  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Sinaloa Rural 0.2732183
 61  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Coahuila, Torreon 0.2500396
 62  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Coahuila, Torreon 0.2500396
 63  A*68-B*40:02-DRB1*16-DQB1*03:01  Ecuador Andes Mixed Ancestry 0.2427824
 64  A*02:22-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.23891,463
 65  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Nuevo Leon, Monterrey city 0.2212226
 66  A*24-B*40:02-DRB1*16-DQB1*03:01  Ecuador Mixed Ancestry 0.21311,173
 67  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Mexico City North 0.1992751
 68  A*02:22-B*40:02-C*03:04-DRB1*16:02-DQB1*03:01-DPB1*04:01  Panama 0.1900462
 69  A*24:02-B*40:02-C*18:01-DRB1*16:02-DQB1*03:01-DPB1*105:01  Panama 0.1900462
 70  A*31:01-B*40:02-C*04:01-DRB1*16:02-DQB1*03:01-DPB1*04:02  Panama 0.1900462
 71  A*68:01-B*40:02-C*03:04-DRB1*16:02-DQB1*03:01-DPB1*02:01  Panama 0.1900462
 72  A*68:01-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01-DPB1*03:01  Panama 0.1900462
 73  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Zacatecas Rural 0.1859266
 74  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Veracruz Rural 0.1848539
 75  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Tlaxcala Rural 0.1807830
 76  A*24:02-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.17111,463
 77  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Jalisco Rural 0.1706585
 78  A*68-B*40:02-DRB1*16-DQB1*03:01  Ecuador Mixed Ancestry 0.17051,173
 79  A*02-B*40:02-DRB1*16-DQB1*03:01  Mexico Durango Rural 0.1529326
 80  A*24:02-B*40:02-DRB1*16:01-DQB1*03:01  Mexico Mexico City Tlalpan 0.1515330
 81  A*68:03-B*40:02-DRB1*16:02-DQB1*03:01  Mexico Mexico City Tlalpan 0.1515330
 82  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Michoacan Rural 0.1433348
 83  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Mexico City North 0.1328751
 84  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Puebla, Puebla city 0.12531,994
 85  A*24-B*40:02-DRB1*16-DQB1*03:01  Ecuador Andes Mixed Ancestry 0.1214824
 86  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Puebla Rural 0.1199833
 87  A*68:01-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.11491,463
 88  A*24-B*40:02-DRB1*16-DQB1*03:01  Mexico Veracruz Rural 0.0924539
 89  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Veracruz Rural 0.0924539
 90  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Jalisco Rural 0.0853585
 91  A*68:01-B*40:02-C*03:04-DRB1*16:02-DQB1*03:01  USA Hispanic pop 2 0.08401,999
 92  A*68-B*40:02-DRB1*16-DQB1*03:01  Mexico Jalisco, Guadalajara city 0.08381,189
 93  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Puebla, Puebla city 0.07521,994
 94  A*31:01-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.06841,463
 95  A*01-B*40:02-DRB1*16-DQB1*03:01  Mexico Tlaxcala Rural 0.0602830
 96  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Tlaxcala Rural 0.0602830
 97  A*31-B*40:02-DRB1*16-DQB1*03:01  Mexico Puebla Rural 0.0600833
 98  A*02:01-B*40:02-C*03:04-DRB1*16:02-DQB1*03:01  USA Hispanic pop 2 0.05601,999
 99  A*01:01-B*40:02-C*03:04-DRB1*16:02-DQB1*03:01  USA Hispanic pop 2 0.04701,999
 100  A*24:02-B*40:02-C*03:06-DRB1*16:02-DQB1*03:01  USA Hispanic pop 2 0.04701,999

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 112) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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