Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 126) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 11.940367
 2  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 5.5944143
 3  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 4.0600234
 4  A*68:03-B*35:12-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 3.731367
 5  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 3.4404218
 6  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 7  A*31:01-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.238867
 8  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.7483143
 9  A*02:06-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 1.492567
 10  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 1.492567
 11  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.3986143
 12  A*02:06-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 1.3761218
 13  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.2800234
 14  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 1.1468218
 15  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 16  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 17  A*02:01-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 18  A*02:06-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 19  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 20  A*24:02-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 21  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 22  A*31:01-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 23  A*68:01-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 24  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 25  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 1.0523261,235
 26  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 27  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 28  A*24:02-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 29  A*31:12-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 30  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.9174218
 31  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.8600234
 32  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.74801,999
 33  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 34  A*68:01-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 35  A*68:01-B*35:12-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 36  A*68:03-B*39:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 37  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 38  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.6881218
 39  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 0.6700261,235
 40  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.6494339
 41  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.5534146,714
 42  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.46501,999
 43  A*02:06-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 44  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 45  A*68:03-B*39:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 46  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*03:01  Mexico Chiapas Lacandon Mayans 0.4587218
 47  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 48  A*02:06-B*07:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339
 49  A*68:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339
 50  B*39:08-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4300234
 51  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4274234
 52  A*03:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 53  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 54  A*31:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 55  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.28361,463
 56  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:01  USA San Diego 0.2600496
 57  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.2584146,714
 58  A*11:01-B*40:49-C*07:02-DRB1*04:07-DQB1*03:02  Malaysia Peninsular Chinese 0.2577194
 59  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.23791,463
 60  A*02:01-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 61  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 62  A*02:06-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.2294218
 63  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 64  A*24:02-B*35:12-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 65  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.2294218
 66  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*14:01  Mexico Chiapas Lacandon Mayans 0.2294218
 67  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 68  A*24:02-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 69  A*31:01-B*35:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 70  A*31:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 71  A*31:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:03-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 72  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:11-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 73  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*14:01  Mexico Chiapas Lacandon Mayans 0.2294218
 74  A*30:01:01-B*07:02:01-C*07:02:01-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.2262221
 75  A*68:03:01-B*35:01:01-C*07:02:01-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.2262221
 76  A*02:01-B*40:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 77  A*02:06-B*39:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*02:02  Nicaragua Managua 0.2165339
 78  A*24:02-B*07:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*14:01  Nicaragua Managua 0.2165339
 79  A*31:01-B*39:11-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*14:01  Nicaragua Managua 0.2165339
 80  A*68:01-B*40:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 81  A*68:03-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 82  A*24:02-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02-DPB1*04:02  Panama 0.1900462
 83  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.16555,926
 84  A*02:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.16235,926
 85  A*31:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.16235,926
 86  A*31:01-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.15515,926
 87  A*68:03-B*35:01-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.14001,999
 88  A*01:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.13401,999
 89  A*68:05-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.09401,999
 90  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.09101,999
 91  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Caribean Hispanic 0.0774115,374
 92  A*24:03:01-B*07:02:01-C*07:02:01-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.0763221
 93  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Caribean Hispanic 0.0732115,374
 94  A*26:01:01-B*45:01-C*07:02:01-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.0611221
 95  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.05301,999
 96  A*02:06-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04901,999
 97  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04901,999
 98  A*02:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 99  A*68:01-B*35:20-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 100  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 126) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
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