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India Karnataka Kannada Speaking

Polymorphic Region:

Demographic Data

  Ethnic origin: Other
  Geographic Region: South Asia
  Latitude: 12º 57' N
  Longitude: 77º 36' E
  Family: Not Known
  Urban/Rural: Urban

Sample Data

  Sample Size: 174
  Test date: 2018
  Method(s): NGS
  Source: Bone Marrow Registry
  Loci typed: A, B, C, DQB1, DRB1
  Additional notes: Allele frequencies at each HLA locus were evaluated for deviations from Hardy- Weinberg equilibrium proportions using a modified version of Guo and Thompson algorithm as implemented in Pypop 0.7.0. Haplotype frequencies were estimated using the itera

Bibliographic Reference

  Author(s): Vani Seshasubramanian, Nirmal Kumar Manisekar, Aruna Devi Sa
  Publication details: Vani Seshasubramanian, Nirmal Kumar Manisekar, Aruna Devi Sathishkannan, Chandramouleeswaran Naganathan, Yogesh Nandakumar and Saranya Narayan. Kannadigas from South India Extended haplotypes in Linkage disequilibrium in Kannadigas of South India. 2018. HLA. 92:193-195. doi: 10.1111/tan.13324.
  Author's e-mail:

Frequency Data

Allele Frequencies Haplotype Frequencies 


Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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