Allele Frequency Net Database
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USA San Diego

Polymorphic Region:

Demographic Data

  Ethnic origin: Mixed
  Geographic Region: North America
  Latitude: 32º 50' N
  Longitude: 117º 15' W
  Family: Not Known
  Urban/Rural: Urban

Sample Data

  Sample Size: 496 (A = 310, B = 312, C = 312, DPB1 = 495, DQA1 = 364, DQB1 = 493)
  Test date: 2017
  Method(s): SSP, SSOP, Sequencing, NGS
  Source: Blood Donor
  Loci typed: A, B, C, DPB1, DQA1, DQB1, DRB1
  Additional notes: Deviations from Hardy-Weinberg proportions were detected at each locus except A and C. Several alleles were found in more than 25% of individuals, including the Class II alleles DPB1*04:01, DPB1*02:01, DQA1*01:02, DQA1*05:01, and DQB1*03:01 and the C

Bibliographic Reference

  Author(s): Eugene Moore
  Publication details: Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 496 adults from San Diego, California, USA
  Author's e-mail:

Frequency Data

Allele Frequencies Haplotype Frequencies  Genotype Data
(download csv)
Ambiguity-resolved Genotype Data
(download csv)


Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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