Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
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Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 57 (from 57) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*01:01:01-B*39:01:01-C*04:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 2  A*01:01:01-B*39:01:01-C*07:01:01-DRB1*04:03:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 3  A*01:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 4  A*01:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 5  A*02:01:01-B*39:01:01-C*04:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 6  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*04:03:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 1.388972
 7  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.777872
 8  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 9  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*14:02:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 1.388972
 10  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*14:06:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 11  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*16:02:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 12  A*02:01-B*39:01  USA North American Native 1.6000187
 13  A*02:01-B*39:01-C*07:02-DRB1*08:04-DQB1*03:01  USA NMDP American Indian South or Central America 0.23415,926
 14  A*02:01-B*39:01-C*07:02-DRB1*08:11-DQB1*04:02  USA NMDP American Indian South or Central America 0.15495,926
 15  A*02:01-B*39:01-DRB1*04:04-DQB1*03:02  USA South Dakota Lakota Sioux 5.1000302
 16  A*02:01-B*39:01-DRB1*04:07-DQB1*03:03  Peru Titikaka Lake Uros 0.4800105
 17  A*02:01-B*39:01-DRB1*08:02-DQB1*04:02  Chile Mapuche 0.770066
 18  A*02:01-B*39:01-DRB1*08:11-DQB1*04:02  USA South Dakota Lakota Sioux 2.2000302
 19  A*02:01-B*39:01-DRB1*14:06  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 20  A*02:01-B*39:01-DRB1*16:02:01-DQB1*03:01  USA South Dakota Lakota Sioux 1.4000302
 21  A*02:06-B*39:01-DRB1*16:02  Mexico Oaxaca Mixtec 3.0000103
 22  A*03:01-B*39:01-C*12:03-DRB1*16:01-DQB1*05:02  Colombia North Wiwa El Encanto 0.961552
 23  A*11:01:01-B*39:01:01-C*04:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 24  A*24:02:01-B*39:01:01-C*04:01:01-DRB1*04:04:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 25  A*24:02:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.083372
 26  A*24:02:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 27  A*24:02:01-B*39:01:01-C*07:01:01-DRB1*14:06:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 28  A*24:02:01-B*39:01:01-C*08:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 29  A*24:02:01-B*39:01:01-C*08:02:01-DRB1*08:02:01  Costa Rica Amerindians (G) 0.4032125
 30  A*24:02-B*39:01  USA North American Native 1.2000187
 31  A*24:02-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 32  A*24:02-B*39:01-DRB1*16:02-DQB1*03:01  Chile Mapuche 1.540066
 33  A*31:01:02-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 34  A*31:01:02-B*39:01-DRB1*04:07-DQB1*03:02  USA South Dakota Lakota Sioux 1.6000302
 35  A*31:01-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.15515,926
 36  A*31:12-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 37  A*33:01-B*39:01-DRB1*08:02-DQB1*04:02  Chile Mapuche 0.770066
 38  A*68:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 39  A*68:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 40  A*68:01:01-B*39:01:01-C*07:01:01-DRB1*16:02:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 41  A*68:01:02-B*39:01-DRB1*04:07-DQB1*03:02  Peru Titikaka Lake Uros 0.4800105
 42  A*68:01-B*39:01-C*03:04-DRB1*04:04-DQB1*04:02  Colombia North Chimila Amerindians 1.063847
 43  A*68:01-B*39:01-C*03:04-DRB1*04:04-DQB1*04:03  Colombia North Chimila Amerindians 1.063847
 44  A*68:01-B*39:01-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.6881218
 45  A*68:01-B*39:01-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 46  A*68:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  USA NMDP Caribean Indian 0.181414,339
 47  A*68:01-B*39:01-DRB1*04:03-DQB1*03:02  Chile Mapuche 2.310066
 48  A*68:01-B*39:01-DRB1*14:02-DQB1*03:01  Chile Mapuche 1.540066
 49  A*68:03:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.777872
 50  A*68:03-B*39:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 51  A*68:06-B*39:01-DRB1*04:07-DQB1*03:03  Peru Titikaka Lake Uros 0.4800105
 52  A*68:16-B*39:01-C*03:04-DRB1*04:04-DQB1*04:02  Colombia North Chimila Amerindians 1.063847
 53  B*39:01-C*01:02  Mexico Oaxaca Mixtec 2.0000103
 54  B*39:01-C*07:02  Mexico Oaxaca Mixtec 3.0000103
 55  B*39:01-C*07:02  Mexico Oaxaca Mixe 1.000055
 56  B*39:01-C*07:02  USA North American Native 3.2000187
 57  B*39:01-C*08:02  Mexico Oaxaca Mixtec 1.0000103

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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