Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

Please specify your search by selecting options from boxes. Then, click "Search" to find HLA Haplotype frequencies that match your criteria. Remember at least one option must be selected.
A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 71 (from 71) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*02:01:01-B*39:08-C*07:02:01-DRB1*01:02:01  Nicaragua Mestizo (G) 0.3226155
 2  A*02:01:01-B*39:08-C*07:02:01-DRB1*04:07  Costa Rica Amerindians (G) 1.9962125
 3  A*02:01:01-B*39:08-C*07:02:01-DRB1*04:10:01-DQB1*04:02:01  Costa Rica Central Valley Mestizo (G) 0.2262221
 4  A*02:01:01-B*39:08-C*07:02:01-DRB1*08:02:01  Costa Rica Amerindians (G) 0.1116125
 5  A*02:01:01-B*39:08-C*07:02:01-DRB1*13:02:01-DQB1*06:04  Costa Rica Central Valley Mestizo (G) 0.2262221
 6  A*02:01:01-B*39:08-C*07:02:01-DRB1*14:06:01  Nicaragua Mestizo (G) 0.3226155
 7  A*02:01-B*39:08  USA Hispanic pop 2 0.10101,999
 8  A*02:01-B*39:08-C*07:02-DRB1*04:04-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 9  A*02:01-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.02301,999
 10  A*02:01-B*39:08-C*07:02-DRB1*04:11-DQB1*04:02  USA Hispanic pop 2 0.02301,999
 11  A*02:01-B*39:08-C*07:02-DRB1*16:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.03421,463
 12  A*02:01-B*39:08-C*07:17-DRB1*04:10-DQB1*04:02  USA Hispanic pop 2 0.04701,999
 13  A*02:05:01-B*39:08-C*07:02:01-DRB1*08:02:01  Nicaragua Mestizo (G) 0.3226155
 14  A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.0723221
 15  A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.0911221
 16  A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*06:02  Costa Rica Central Valley Mestizo (G) 0.0628221
 17  A*02:06-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 18  A*02:06-B*39:08-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 19  A*02:06-B*39:08-C*15:02-DRB1*16:11-DQB1*03:01-DPB1*04:02  Panama 0.1900462
 20  A*02:22-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 21  A*02:22-B*39:08-C*07:02-DRB1*11:01-DQB1*03:01  Colombia Bogotá Cord Blood 0.03421,463
 22  A*03:01-B*39:08-C*07:02-DRB1*04:05-DQA1*03:01-DQB1*04:02-DPB1*04:02  Nicaragua Managua 0.2165339
 23  A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 0.0511221
 24  A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.0109221
 25  A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*06:02  Costa Rica Central Valley Mestizo (G) 0.0876221
 26  A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*06:03  Costa Rica Central Valley Mestizo (G) 0.0766221
 27  A*23:01-B*39:08-C*02:10-DRB1*04:01-DQB1*04:02-DPB1*04:01  Panama 0.1900462
 28  A*24:02:01-B*39:08-C*03:04:01-DRB1*08:02:01  Costa Rica Amerindians (G) 0.4080125
 29  A*24:02:01-B*39:08-C*07:02:01-DRB1*04:10:01-DQB1*04:02:01  Costa Rica Central Valley Mestizo (G) 0.2262221
 30  A*24:02-B*39:08-C*07:02-DRB1*04:05-DQB1*04:02-DPB1*14:01  Panama 0.1900462
 31  A*24:02-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 32  A*24:02-B*39:08-C*07:02-DRB1*04:10-DQB1*04:02  Colombia Bogotá Cord Blood 0.05671,463
 33  A*24:02-B*39:08-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 34  A*24:14-B*39:08-C*07:02-DRB1*04:10-DQB1*04:02  Colombia Bogotá Cord Blood 0.04581,463
 35  A*24:14-B*39:08-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03421,463
 36  A*24:14-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.06841,463
 37  A*30:02:01-B*39:08-C*04:01:01-DRB1*01:02:01-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.2262221
 38  A*30:02:01-B*39:08-C*07:01:01-DRB1*08:02:01  Nicaragua Mestizo (G) 0.3226155
 39  A*30:02:01-B*39:08-C*07:02:01-DRB1*14:06:01  Nicaragua Mestizo (G) 0.3226155
 40  A*31:01:02-B*39:08-C*07:02:01-DRB1*04:07  Nicaragua Mestizo (G) 0.3226155
 41  A*31:01-B*39:08-C*04:01-DRB1*04:10-DQB1*04:02-DPB1*14:01  Panama 0.1900462
 42  A*31:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:03-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 43  A*32:01-B*39:08-C*07:02-DRB1*04:05-DQB1*04:02  Colombia Bogotá Cord Blood 0.03421,463
 44  A*33:03-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.03421,463
 45  A*68:01:02-B*39:08-C*07:02:01-DRB1*08:02:01-DQB1*04:02:01  Costa Rica Central Valley Mestizo (G) 0.4525221
 46  A*68:01-B*39:08-C*07:02-DRB1*04:01-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 47  A*68:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339
 48  A*68:01-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 49  A*68:01-B*39:08-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 50  A*68:03-B*39:08  USA Hispanic pop 2 0.02501,999
 51  A*68:03-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 52  A*68:03-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 53  A*68:03-B*39:08-C*07:17-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPB1*03:01  Nicaragua Managua 0.2165339
 54  A*68:03-B*39:08-C*07:17-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 55  A*68:03-B*39:08-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 2.080096
 56  A*68:03-B*39:08-DRB1*08:02  Mexico Mixtec 2.100097
 57  A*68:05-B*39:08  USA Hispanic pop 2 0.07601,999
 58  A*68:05-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.09401,999
 59  A*68:07-B*39:08  USA Hispanic pop 2 0.02501,999
 60  A*68:07-B*39:08-C*07:02:01-DRB1*09:01:02  Nicaragua Mestizo (G) 0.3226155
 61  A*68:07-B*39:08-C*07:02:01-DRB1*14:02-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 0.9050221
 62  A*68:07-B*39:08-C*07:02-DRB1*01:02-DQA1*05:01-DQB1*05:01-DPB1*04:02  Nicaragua Managua 0.2165339
 63  A*68:07-B*39:08-C*07:02-DRB1*04:03-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 64  B*39:08-C*07:02  Mexico Oaxaca Mixtec 1.0000103
 65  B*39:08-C*07:02  Mexico Oaxaca Zapotec 2.200090
 66  B*39:08-C*07:02  Mexico Mexico City Mestizo pop 2 0.6400234
 67  B*39:08-C*07:02  USA Hispanic pop 2 0.17601,999
 68  B*39:08-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4300234
 69  B*39:08-C*07:17  Mexico Mexico City Mestizo population 0.3497143
 70  B*39:08-C*07:17  USA Hispanic pop 2 0.05001,999
 71  B*39:08-C*07:17-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

support@allelefrequencies.net

Valid XHTML 1.0 Transitional