Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 211) records   Pages: 1 2 3 of 3  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 11.940367
 2  A*02-B*39-DRB1*04:07-DQA1*03-DQB1*03:02  Mexico Mazatecan 10.800089
 3  A*02:06-B*39:02-DRB1*04:07  Mexico Oaxaca Mixe 9.000055
 4  A*24-B*39-DRB1*04:07-DQB1*03:02  Mexico Sinaloa Capomos Mayo Yoremes 8.156560
 5  A*68:03-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 7.290096
 6  A*68-B*39-DRB1*04:07-DQB1*03:02  Guatemala Mayan 6.4000132
 7  A*68:03-B*39:45-DRB1*04:07  Mexico Mixtec 6.300097
 8  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 5.5944143
 9  A*68-B*39-DRB1*04:07-DQB1*03:02  Mexico San Vicente Tancuayalab Teenek/Huastecos 5.230053
 10  A*68-B*39-DRB1*04:07-DQB1*03:02  Mexico Huasteca Region Teenek 5.200055
 11  A*02-B*39-DRB1*04:07-DQB1*03:02  Mexico San Vicente Tancuayalab Teenek/Huastecos 4.760053
 12  A*02-B*39-DRB1*04:07-DQB1*03:02  Guatemala Mayan 4.2000132
 13  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 4.0600234
 14  A*24:02-B*39:05-DRB1*04:07  Mexico Mixtec 3.900097
 15  A*24-B*39-DRB1*04:07-DQA1*03-DQB1*03:02  Colombia Jaidukama 3.800039
 16  A*02-B*39-DRB1*04:07-DQB1*03:02  Mexico Huasteca Region Teenek 3.700055
 17  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 3.4404218
 18  A*24:02-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 3.410096
 19  A*24-B*39-DRB1*04:07-DQA1*03-DQB1*03:02  Mexico Mazatecan 3.300089
 20  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 21  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.777872
 22  A*68:03:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.777872
 23  A*02-B*39-DRB1*04:07-DQB1*03:02  Mexico Sinaloa Capomos Mayo Yoremes 2.676860
 24  A*24:02:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.083372
 25  A*02:01:01-B*39:08-C*07:02:01-DRB1*04:07  Costa Rica Amerindians (G) 1.9962125
 26  A*68:01-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 1.9697330
 27  A*68:01-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 1.785784
 28  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.7483143
 29  A*24:02-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 1.704588
 30  A*31:01:02-B*39:01-DRB1*04:07-DQB1*03:02  USA South Dakota Lakota Sioux 1.6000302
 31  A*68:03-B*39:05-C*07:02-DRB1*04:07  USA Mexican American Mestizo 1.6000553
 32  A*02:06-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 1.560096
 33  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.3986143
 34  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.2800234
 35  A*68:01-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 1.280096
 36  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 1.1468218
 37  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 38  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 39  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 40  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 41  A*32:01-B*39:05-C*17:01-DRB1*04:07-DQB1*06:04  Colombia North Chimila Amerindians 1.063847
 42  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 1.0523261,235
 43  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 44  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 45  A*24:02-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 46  A*31:12-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 47  A*68-B*39-DRB1*04:07-DQB1*03:01  Mexico San Vicente Tancuayalab Teenek/Huastecos 0.940053
 48  A*02:01-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.9091330
 49  A*68-B*39-DRB1*04:07  USA NMDP Hispanic 0.9000449,844
 50  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.8600234
 51  A*02:01:01-B*39:02:02-C*03:04:01-DRB1*04:07  Costa Rica Amerindians (G) 0.8431125
 52  A*68:05-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Amerindians (G) 0.8065125
 53  A*02-B*39-DRB1*04:07  USA NMDP Hispanic 0.8000449,844
 54  A*68:16-B*39:03-DRB1*04:07-DQB1*03:02  Chile Mapuche 0.770066
 55  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.74801,999
 56  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 57  A*68:03-B*39:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 58  A*68-B*39-DRB1*04:07-DQB1*03:02  Bolivia Quechua 0.720069
 59  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 60  A*01:01:01-B*39:01:01-C*04:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 61  A*01:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 62  A*02:01:01-B*39:01:01-C*04:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 63  A*02:01:01-B*39:02:02-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 64  A*02:01:01-B*39:05:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 65  A*11:01:01-B*39:01:01-C*04:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 66  A*31:01:02-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 67  A*68:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 68  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 0.6700261,235
 69  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.6494339
 70  A*24:02:01-B*39:02:02-C*03:04:01-DRB1*04:07  Nicaragua Mestizo (G) 0.6452155
 71  A*24:02-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Mexico City Tlalpan 0.6061330
 72  A*02:01-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 73  A*02:01-B*39:06-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 74  A*03:01-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 75  A*24:02-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 76  A*24:02-B*39:01-DRB1*04:07-DQB1*04:02  Mexico Veracruz Xalapa 0.595284
 77  A*32:01-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Veracruz Xalapa 0.595284
 78  A*02-B*39-DRB1*04:07-DQB1*03:02  Bolivia Quechua 0.590069
 79  A*02:01-B*39:06-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 80  A*26:01-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 81  A*31:01-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 82  A*68:01-B*39:01-DRB1*04:07-DQB1*03:01  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 83  A*68:01-B*39:01-DRB1*04:07-DQB1*03:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 84  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.5534146,714
 85  A*11:01-B*39:05-C*04:01-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  USA San Diego 0.5210496
 86  A*68-B*39-DRB1*04:07  Chile Santiago 0.4956920
 87  A*02:01-B*39:01-DRB1*04:07-DQB1*03:03  Peru Titikaka Lake Uros 0.4800105
 88  A*68:01:02-B*39:01-DRB1*04:07-DQB1*03:02  Peru Titikaka Lake Uros 0.4800105
 89  A*68:06-B*39:01-DRB1*04:07-DQB1*03:03  Peru Titikaka Lake Uros 0.4800105
 90  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.46501,999
 91  A*02:06-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 92  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 93  A*68:03-B*39:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 94  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*03:01  Mexico Chiapas Lacandon Mayans 0.4587218
 95  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 96  A*02:01:01-B*39:02:02-C*03:04:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 97  A*02:11:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 98  A*68:03:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 99  A*02-B*39-DRB1*04:07  Chile Santiago 0.4478920
 100  A*02:01-B*39:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 211) records   Pages: 1 2 3 of 3  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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