Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

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Displaying 1 to 100 (from 129) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:01-B*39:09-DRB1*08:02-DQB1*04:02  Chile Mapuche 6.150066
 2  A*02-B*39-DRB1*08:02-DQB1*04:02  Bolivia La Paz Aymaras 3.426087
 3  A*32:01:01-B*39:09:01-C*07:02:01-DRB1*08:02:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*04:02:01  Brazil Barra Mansa Rio State Black 2.381073
 4  A*31:01-B*39:05-DRB1*08:02  Mexico Mixtec 2.100097
 5  A*68:03-B*39:08-DRB1*08:02  Mexico Mixtec 2.100097
 6  A*31:01-B*39:05-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 2.080096
 7  A*68:03-B*39:08-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 2.080096
 8  A*68:01-B*39:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Tlalpan 1.5152330
 9  B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 1.3986143
 10  A*31:01-B*39:05-C*03:04-DRB1*08:02  Brazil Vale do Ribeira Quilombos 1.3889144
 11  A*31-B*39-DRB1*08:02-DQB1*04:02  Bolivia La Paz Aymaras 1.241087
 12  A*31:01-B*39:01-DRB1*08:02-DQB1*04:02  Mexico Veracruz Xalapa 1.190584
 13  A*02-B*39-DRB1*08:02  Chile Santiago 1.1772920
 14  B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 1.0700234
 15  A*68:01-B*39:05-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*04:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 16  A*02-B*39-DRB1*08:02-DQB1*03:02  Colombia Wayu from Guajira Peninsula 1.040048
 17  A*02:12-B*39:05-DRB1*08:02  New Zealand Maori with Admixed History 0.9524105
 18  A*68-B*39-DRB1*08:02  Chile Santiago 0.9097920
 19  A*02-B*39-DRB1*08:02-DQB1*04:02  Bolivia Quechua 0.860069
 20  A*02:01-B*39:01-DRB1*08:02-DQB1*04:02  Chile Mapuche 0.770066
 21  A*33:01-B*39:01-DRB1*08:02-DQB1*04:02  Chile Mapuche 0.770066
 22  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02  Mexico Tixcacaltuyub Maya 0.746367
 23  A*01:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 24  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 25  A*24:02:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 26  A*24:02:01-B*39:01:01-C*08:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 27  A*31:01:02-B*39:06:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 28  A*68:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 29  A*68:01:01-B*39:02:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 30  A*68-B*39-DRB1*08:02-DQB1*04:02  Bolivia La Paz Aymaras 0.692087
 31  A*68:01-B*39:01-DRB1*08:02-DQB1*04:02  Mexico Veracruz Xalapa 0.595284
 32  A*36-B*39:01-DRB1*08:02-DQB1*04:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 33  A*68:01-B*39:08-DRB1*08:02  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 34  A*02:01-B*39:09-DRB1*08:02-DQB1*03:02  Peru Titikaka Lake Uros 0.4800105
 35  A*24:02-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 36  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 37  A*24:02:01-B*39:05:01-C*07:02:01-DRB1*08:02:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 38  A*24:02-B*39:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Tlalpan 0.4545330
 39  A*68:01:02-B*39:08-C*07:02:01-DRB1*08:02:01-DQB1*04:02:01  Costa Rica Central Valley Mestizo (G) 0.4525221
 40  B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4300234
 41  B*39:02-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4300234
 42  A*24:02-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4274234
 43  A*68:01-B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4274234
 44  A*24:02:01-B*39:08-C*03:04:01-DRB1*08:02:01  Costa Rica Amerindians (G) 0.4080125
 45  A*24:02:01-B*39:01:01-C*08:02:01-DRB1*08:02:01  Costa Rica Amerindians (G) 0.4032125
 46  A*01:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 47  A*02:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 48  A*02:06-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 49  A*24:02-B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 50  A*68:01-B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 51  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 52  A*68:03-B*39:08-C*07:17-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 53  B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 54  B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 55  B*39:08-C*07:17-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 56  A*02:05:01-B*39:08-C*07:02:01-DRB1*08:02:01  Nicaragua Mestizo (G) 0.3226155
 57  A*03:01:01-B*39:05:01-C*07:02:01-DRB1*08:02:01  Nicaragua Mestizo (G) 0.3226155
 58  A*30:02:01-B*39:08-C*07:01:01-DRB1*08:02:01  Nicaragua Mestizo (G) 0.3226155
 59  A*02:01-B*39:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Tlalpan 0.3030330
 60  A*02-B*39-DRB1*08:02  USA NMDP Hispanic 0.3000449,844
 61  A*02:22-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.27341,463
 62  A*02:06-B*39:08-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 63  A*31:01-B*39:05-C*04:01-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 64  A*68:05-B*39:02-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*02:01  Mexico Chiapas Lacandon Mayans 0.2294218
 65  A*68:05-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 66  A*68:03-B*39:08-C*07:17-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPB1*03:01  Nicaragua Managua 0.2165339
 67  A*02:06-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  USA NMDP Hawaiian or other Pacific Islander 0.211111,499
 68  A*24-B*39-DRB1*08:02  USA NMDP Hispanic 0.2000449,844
 69  A*68-B*39-DRB1*08:02  USA NMDP Hispanic 0.2000449,844
 70  A*03:01-B*39:05-C*04:01-DRB1*08:02-DQB1*04:03-DPB1*04:02  Panama 0.1900462
 71  A*34:02-B*39:01-C*03:05-DRB1*08:02-DQB1*03:01-DPB1*04:02  Panama 0.1900462
 72  A*02:06-B*39:01-C*07:02-DRB1*08:02  Japan pop 16 0.162018,604
 73  A*68:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.15691,463
 74  A*02-B*39-DRB1*08:02-DQA1*04:01-DQB1*04:02  Brazil Paraná Caucasian 0.1560641
 75  A*31-B*39-DRB1*08:02-DQA1*04:01-DQB1*04:02  Brazil Paraná Caucasian 0.1560641
 76  A*68:05-B*39:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Tlalpan 0.1515330
 77  A*02:01-B*39:01-DRB1*08:02  Israel Argentina Jews 0.13604,307
 78  A*02:01:01-B*39:08-C*07:02:01-DRB1*08:02:01  Costa Rica Amerindians (G) 0.1116125
 79  A*02:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.10781,463
 80  A*24:02-B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.09501,999
 81  A*11:01-B*39:01-C*07:02-DRB1*08:02  Germany DKMS - China minority 0.07801,282
 82  A*11-B*39-DRB1*08:02-DQA1*04:01-DQB1*04:02  Brazil Paraná Caucasian 0.0780641
 83  A*24-B*39-DRB1*08:02-DQA1*04:01-DQB1*04:02  Brazil Paraná Caucasian 0.0780641
 84  A*29-B*39-DRB1*08:02-DQA1*04:01-DQB1*04:02  Brazil Paraná Caucasian 0.0780641
 85  A*02:06-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 86  A*02:06-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 87  A*68:02-B*39:01-DRB1*08:02  Israel Argentina Jews 0.06424,307
 88  A*24-B*39-DRB1*08:02  Chile Santiago 0.0603920
 89  A*31-B*39-DRB1*08:02  Chile Santiago 0.0601920
 90  A*24:02-B*39:01-C*07:02-DRB1*08:02  Japan pop 16 0.052018,604
 91  A*31:01-B*39:03-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.04701,999
 92  A*26:01-B*39:01-C*07:02-DRB1*08:02  Germany DKMS - China minority 0.03901,282
 93  A*24:03-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03801,463
 94  A*02:01-B*39:11-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03651,463
 95  A*24:14-B*39:08-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03421,463
 96  A*03:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03271,463
 97  A*03:02-B*39:01-DRB1*08:02  Israel Argentina Jews 0.03164,307
 98  A*26:01-B*39:01-C*07:02-DRB1*08:02  Japan pop 16 0.031018,604
 99  A*02:06-B*39:01-C*07:02-DRB1*08:02-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 100  A*02:06-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*03:01  Japan pop 17 0.03003,078

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 129) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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