Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
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Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 68 (from 68) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:01-B*39:09-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 33.700073
 2  A*02:04-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 19.800073
 3  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 11.940367
 4  A*24:02-B*39:05-C*07:02-DRB1*04:03-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 9.300073
 5  B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 4.861172
 6  A*02:04-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*14:01  Venezuela Sierra de Perija Yucpa 4.700073
 7  A*68:01-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 4.1284218
 8  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 3.4404218
 9  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 10  A*24:02-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.238867
 11  A*31:01-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 1.6667150
 12  A*02-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 1.388972
 13  A*24-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 1.388972
 14  A*68-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 1.388972
 15  A*31:01-B*39:01-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 1.3333150
 16  A*02:13-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*14:01  Venezuela Sierra de Perija Yucpa 1.200073
 17  A*68:01-B*39:09-C*07:02-DRB1*04:03-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 1.200073
 18  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 1.1468218
 19  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 20  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 21  A*68:01-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 22  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 23  A*31:01-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 24  A*68:01-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 25  A*68:01-B*39:06-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 26  A*68:03-B*39:02-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 27  A*68:03-B*39:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 28  A*68:03-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 29  A*01-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 0.694472
 30  A*24:02-B*39:06-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.6881218
 31  A*68:01-B*39:01-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.6881218
 32  A*02:01-B*39:04-C*07:01-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 0.6667150
 33  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.6494339
 34  A*02:06-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 35  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 36  A*68:03-B*39:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 37  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*03:01  Mexico Chiapas Lacandon Mayans 0.4587218
 38  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 39  A*68:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339
 40  A*68:01-B*39:01-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 0.3333150
 41  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:01  USA San Diego 0.2600496
 42  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 43  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 44  A*24:02-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 45  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.2294218
 46  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*14:01  Mexico Chiapas Lacandon Mayans 0.2294218
 47  A*24:02-B*39:05-C*07:02-DRB1*04:10-DQA1*03:01-DQB1*03:03-DPA1*02:01-DPB1*14:01  Mexico Chiapas Lacandon Mayans 0.2294218
 48  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 49  A*24:02-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 50  A*24:02-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 51  A*31:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 52  A*31:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:03-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 53  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:11-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 54  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*14:01  Mexico Chiapas Lacandon Mayans 0.2294218
 55  A*02:06-B*39:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*02:02  Nicaragua Managua 0.2165339
 56  A*24:02-B*39:05-C*07:02-DRB1*04:05-DQA1*03:01-DQB1*03:02-DPB1*11:01  Nicaragua Managua 0.2165339
 57  A*31:01-B*39:11-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*14:01  Nicaragua Managua 0.2165339
 58  A*68:01-B*39:08-C*07:02-DRB1*04:01-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 59  A*68:03-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 60  A*24-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Spain, Castilla y Leon, Northwest, 0.09851,743
 61  A*24:02-B*39:02-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Japan pop 17 0.07003,078
 62  A*26:02-B*39:01-C*07:02-DRB1*04:06-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 63  A*26:03-B*39:01-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Japan pop 17 0.07003,078
 64  A*32-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Spain, Castilla y Leon, Northwest, 0.06571,743
 65  A*02:06-B*39:01-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 66  A*02:06-B*39:01-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Japan pop 17 0.03003,078
 67  A*24:02-B*39:04-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 68  A*31:01-B*39:04-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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