Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 54 (from 54) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*24-B*39:05-DRB1*14:02-DQA1*05:01-DQB1*03:01  Colombia Jaidukama 5.800039
 2  A*02-B*39-DRB1*14:02-DQB1*03:01  Peru Lamas City Lama 3.600083
 3  A*02:01-B*39:09-DRB1*14:02-DQB1*03:01  Chile Mapuche 2.310066
 4  A*68:01-B*39:01-DRB1*14:02-DQB1*03:01  Chile Mapuche 1.540066
 5  A*68:01-B*39:09-DRB1*14:02-DQB1*03:01  Chile Mapuche 1.540066
 6  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*14:02:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 1.388972
 7  A*68-B*39-DRB1*14:02-DQB1*03:01  Bolivia La Paz Aymaras 1.310087
 8  A*24:02-B*39:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 9  A*24:02-B*39:05-C*07:02-DRB1*14:02-DQA1*05:01-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 10  A*24:02-B*39:06-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 11  A*68:07-B*39:08-C*07:02:01-DRB1*14:02-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 0.9050221
 12  A*31:01-B*39:03-DRB1*14:02-DQB1*03:01  Chile Mapuche 0.770066
 13  A*68:01-B*39:14-DRB1*14:02-DQB1*03:01  Chile Mapuche 0.770066
 14  A*68:03-B*39:05-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01  Mexico Tixcacaltuyub Maya 0.746367
 15  B*39:05-C*07:02-DRB1*14:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.6400234
 16  A*30:01-B*39:01-DRB1*14:02-DQB1*03:01  Mexico Veracruz Xalapa 0.595284
 17  A*31:01-B*39:01-DRB1*14:02-DQB1*03:01  Mexico Veracruz Xalapa 0.595284
 18  A*01:01-B*39:01-DRB1*14:02-DQB1*03:01  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 19  A*32:01-B*39:01-DRB1*14:02-DQB1*03:01  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 20  A*68:01:02-B*39:05-DRB1*14:02-DQB1*03:01  Peru Titikaka Lake Uros 0.4800105
 21  A*02:01-B*39:05-C*07:02-DRB1*14:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.4274234
 22  A*68-B*39-DRB1*14:02-DQB1*03:01  Guatemala, Guatemala City Mixed Ancestry 0.3900127
 23  A*24:02-B*39:01-C*07:02-DRB1*14:02-DQB1*03:01  Mexico Mexico City Mestizo population 0.3497143
 24  B*39:01-C*07:02-DRB1*14:02-DQB1*03:01  Mexico Mexico City Mestizo population 0.3497143
 25  A*24:02-B*39:05-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.33931,463
 26  A*24:02-B*39:06-DRB1*14:02-DQB1*03:01  Mexico Mexico City Tlalpan 0.3030330
 27  A*68:01-B*39:01-DRB1*14:02-DQB1*03:01  Mexico Mexico City Tlalpan 0.3030330
 28  A*24:02-B*39:05-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 29  A*24:02-B*39:08-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 30  A*68:01-B*39:01-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 31  A*68:01-B*39:05-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 32  A*68:03-B*39:05-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 33  A*68:01:02-B*39:05:01-C*07:02:01-DRB1*14:02-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 0.2262221
 34  A*02:01-B*39:11-C*04:01-DRB1*14:02-DQA1*05:01-DQB1*03:01-DPB1*04:01  Nicaragua Managua 0.2165339
 35  A*68:05-B*39:05-C*07:02-DRB1*14:02-DQA1*05:01-DQB1*03:01-DPB1*04:02  Nicaragua Managua 0.2165339
 36  A*31:01-B*39:11-C*01:02-DRB1*14:02-DQB1*03:01-DPB1*04:02  Panama 0.1900462
 37  A*68:01-B*39:05-C*07:02-DRB1*14:02-DQB1*03:01-DPB1*04:02  Panama 0.1900462
 38  A*02:01-B*39:06-DRB1*14:02-DQB1*03:01  Mexico Mexico City Tlalpan 0.1515330
 39  A*24:02-B*39:01-DRB1*14:02-DQB1*03:01  Mexico Mexico City Tlalpan 0.1515330
 40  A*26:01-B*39:01-DRB1*14:02-DQB1*03:01  Mexico Mexico City Tlalpan 0.1515330
 41  A*68:01-B*39:02-DRB1*14:02-DQB1*03:01  Mexico Mexico City Tlalpan 0.1515330
 42  A*02:01-B*39:11-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.09891,463
 43  A*24:14-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.06841,463
 44  A*02:01-B*39:05-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.04221,463
 45  A*02:22-B*39:11-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.03551,463
 46  A*02:13-B*39:01-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.03421,463
 47  A*24:02-B*39:09-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.03421,463
 48  A*24:02-B*39:19-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.03421,463
 49  A*29:02-B*39:05-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.03421,463
 50  A*33:03-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.03421,463
 51  A*02:01-B*39:12-C*01:02-DRB1*14:02-DQB1*03:01  USA Hispanic pop 2 0.01201,999
 52  A*02:22-B*39:12-C*01:02-DRB1*14:02-DQB1*03:01  USA Hispanic pop 2 0.01201,999
 53  A*24:02-B*39:05-C*07:02-DRB1*14:02-DQB1*03:01  USA Hispanic pop 2 0.01201,999
 54  A*26:01-B*39:05-C*07:02-DRB1*14:02-DQB1*03:01  USA Hispanic pop 2 0.01201,999

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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