Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 65 (from 65) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*11:01:01-B*39:01-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01-DPB1*05:01  China Yunnan Province Nu 2.6000107
 2  A*11:01:01-B*39:01-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01-DPB1*05:01  China Yunnan Province Lisu 2.5000111
 3  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01  China Zhejiang Han 0.86321,734
 4  A*02:06-B*39:01-C*07:02-DRB1*08:03-DQB1*06:01  USA NMDP Hawaiian or other Pacific Islander 0.543611,499
 5  A*11:01-B*39:01-C*07:02-DRB1*08:03  Japan pop 16 0.433018,604
 6  A*11:01-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.33003,078
 7  A*11:01-B*39:01-C*07:02-DRB1*08:03-DQB1*06:01  USA Asian pop 2 0.31101,772
 8  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01  China Zhejiang Han 0.27741,734
 9  A*11:01:01:01-B*39:01:01:03-C*07:02:01-DRB1*08:03:02-DQB1*03:01  Russia Bashkortostan, Tatars 0.2604192
 10  A*24:02-B*39:01-C*07:02-DRB1*08:03-DQB1*06:01  USA NMDP Hawaiian or other Pacific Islander 0.232911,499
 11  A*11:01-B*39:01-C*07:02-DRB1*08:03  Hong Kong Chinese BMDR 0.21097,595
 12  A*02:01-B*39:01-C*07:02-DRB1*08:03  Germany DKMS - China minority 0.19501,282
 13  A*26:01-B*39:01-C*07:02-DRB1*08:03-DQB1*06:01  USA NMDP Hawaiian or other Pacific Islander 0.177311,499
 14  A*26:01-B*39:01-C*07:02-DRB1*08:03  Germany DKMS - China minority 0.15501,282
 15  A*26:01-B*39:01-C*07:02-DRB1*08:03  Hong Kong Chinese BMDR 0.13027,595
 16  A*02:06-B*39:01-C*07:02-DRB1*08:03  Japan pop 16 0.125018,604
 17  A*24:02-B*39:01-C*07:02-DRB1*08:03  Japan pop 16 0.120018,604
 18  A*02:06:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01  China Zhejiang Han 0.11531,734
 19  A*24:02-B*39:01-C*07:02-DRB1*08:03  Germany DKMS - China minority 0.11001,282
 20  A*11:01-B*39:01-C*07:02-DRB1*08:03-DQB1*06:01  Malaysia Peninsular Malay 0.1052951
 21  A*11:01-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.10003,078
 22  A*26:01-B*39:01-C*07:02-DRB1*08:03  Japan pop 16 0.094018,604
 23  A*24:02-B*39:01-C*07:02-DRB1*08:03  Hong Kong Chinese BMDR 0.08497,595
 24  A*02:01-B*39:01-C*07:02-DRB1*08:03  Japan pop 16 0.083018,604
 25  A*02:07-B*39:01-C*07:02-DRB1*08:03  Germany DKMS - China minority 0.08301,282
 26  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*13:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.08185,266
 27  A*02:06-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 28  A*24:02-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 29  A*26:01:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.06425,266
 30  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.05345,266
 31  A*02:11-B*39:01-C*07:02-DRB1*08:03-DQB1*06:01  Malaysia Peninsular Malay 0.0526951
 32  A*02:01-B*39:01-C*07:02-DRB1*08:03  Hong Kong Chinese BMDR 0.04717,595
 33  A*33:03-B*39:01-C*07:02-DRB1*08:03-DQB1*06:01  USA Asian pop 2 0.04401,772
 34  A*02:03-B*39:01-C*07:02-DRB1*08:03  Germany DKMS - China minority 0.03901,282
 35  A*02:06-B*39:01-C*07:02-DRB1*08:03  Germany DKMS - China minority 0.03901,282
 36  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03705,266
 37  A*31:01-B*39:01-C*07:02-DRB1*08:03  Japan pop 16 0.037018,604
 38  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03695,266
 39  A*31:01:02-B*39:01:01-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01  China Zhejiang Han 0.03271,734
 40  A*11:02-B*39:01-C*07:02-DRB1*08:03  Hong Kong Chinese BMDR 0.03067,595
 41  A*02:06-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 42  A*02:06-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*02:02-DPB1*19:01  Japan pop 17 0.03003,078
 43  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.03005,266
 44  A*11:01-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*01:03-DPB1*04:01  Japan pop 17 0.03003,078
 45  A*26:01-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 46  A*26:01-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 47  A*33:03-B*39:01-C*07:02-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 48  A*26:01:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.02845,266
 49  A*02:03-B*39:01-C*07:02-DRB1*08:03  Hong Kong Chinese BMDR 0.02267,595
 50  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02155,266
 51  A*31:01:02-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02105,266
 52  A*26:01:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01  China Zhejiang Han 0.02001,734
 53  A*31:01-B*39:01-C*07:02-DRB1*08:03  Hong Kong Chinese BMDR 0.01977,595
 54  A*02:03:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.01905,266
 55  A*24:20:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01905,266
 56  A*02:07:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01685,266
 57  A*02:03-B*39:01-C*07:02-DRB1*08:03-DQB1*06:01  USA Asian pop 2 0.01101,772
 58  A*11:02-B*39:01-C*07:02-DRB1*08:03-DQB1*06:01  USA Asian pop 2 0.01101,772
 59  A*26:02-B*39:01-C*07:02-DRB1*08:03  Japan pop 16 0.010018,604
 60  A*33:03-B*39:01-C*07:02-DRB1*08:03  Japan pop 16 0.010018,604
 61  A*24:07-B*39:01-C*07:02-DRB1*08:03  Hong Kong Chinese BMDR 0.00667,595
 62  A*02:07:01-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.00635,266
 63  A*02:281-B*39:01:01-C*07:02:01-DRB1*08:03:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00615,266
 64  A*33:03-B*39:01-C*07:02-DRB1*08:03  Hong Kong Chinese BMDR 0.00547,595
 65  A*26:03-B*39:01-C*07:02-DRB1*08:03  Japan pop 16 0.005018,604

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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