Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 59 (from 59) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*39:01-DRB1*12:02:01  Taiwan Saisiat 24.400051
 2  B*39:01-DRB1*12:02:01  Taiwan Atayal 8.0000106
 3  B*39:01-DRB1*12:02:01  Taiwan Taroko 3.500055
 4  B*39:01-DRB1*12:02:01  Taiwan Bunun 2.0000101
 5  A*24:02-B*39:01-DRB1*12:02  Taiwan Tzu Chi Morrow Donor Registry Aborigine 1.9310233
 6  B*39:01-DRB1*12:02:01  Philippines Ivatan 1.000050
 7  B*39:01-DRB1*12:02:01  Taiwan Rukai 1.000050
 8  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01  China Jingpo Minority 0.5210105
 9  A*11:01:01-B*39:01:01-DRB1*12:02:01  China Jingpo Minority 0.5210105
 10  B*39:01:01-C*07:02:01-DRB1*12:02:01  China Jingpo Minority 0.5210105
 11  B*39:01:01-DRB1*12:02:01  China Jingpo Minority 0.5210105
 12  A*02:06-B*39:01-C*07:02-DRB1*12:02-DQB1*03:02  Malaysia Peninsular Chinese 0.2577194
 13  A*11:01-B*39:01-C*07:02-DRB1*12:02-DQB1*05:02  Malaysia Peninsular Chinese 0.2577194
 14  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DQB1*03:01:01  China Zhejiang Han 0.11721,734
 15  A*11:01-B*39:01-DRB1*12:02  Hong Kong Chinese cord blood registry 0.09323,892
 16  A*02:03-B*39:01-C*07:02-DRB1*12:02  Germany DKMS - China minority 0.07801,282
 17  A*31:01-B*39:01-C*07:02-DRB1*12:02  Germany DKMS - China minority 0.07801,282
 18  A*02:01-B*39:01-C*07:02-DRB1*12:02  Hong Kong Chinese BMDR 0.06947,595
 19  A*02:01-B*39:01-DRB1*12:02  Hong Kong Chinese cord blood registry 0.06023,892
 20  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DQB1*03:01:01  China Zhejiang Han 0.05771,734
 21  A*02:06-B*39:01-C*12:03-DRB1*12:02-DQB1*05:01  Malaysia Peninsular Malay 0.0526951
 22  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.04555,266
 23  A*02:03-B*39:01-C*07:02-DRB1*12:02-DQB1*03:01  USA Asian pop 2 0.04401,772
 24  A*02:01-B*39:01-C*08:01-DRB1*12:02  Germany DKMS - China minority 0.03901,282
 25  A*11:01-B*39:01-C*07:02-DRB1*12:02  Hong Kong Chinese BMDR 0.03747,595
 26  A*24:02-B*39:01-C*07:02-DRB1*12:02  Hong Kong Chinese BMDR 0.03727,595
 27  A*24:33-B*39:01-C*12:04-DRB1*12:02-DQB1*03:01  India Central UCBB 0.03574,204
 28  A*02:06-B*39:01-C*07:02-DRB1*12:02-DQA1*06:01-DQB1*03:01-DPA1*02:02-DPB1*03:01  Japan pop 17 0.03003,078
 29  A*02:03:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 30  A*03:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 31  A*11:02:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02435,266
 32  A*02:03-B*39:01-C*02:02-DRB1*12:02-DQB1*05:02  India East UCBB 0.02082,403
 33  A*24:33-B*39:01-C*12:04-DRB1*12:02-DQB1*03:01  India East UCBB 0.02082,403
 34  A*02:03-B*39:01-C*12:03-DRB1*12:02  Hong Kong Chinese BMDR 0.01977,595
 35  A*24:02-B*39:01-DRB1*12:02  Hong Kong Chinese cord blood registry 0.01603,892
 36  A*02:06-B*39:01-C*07:02-DRB1*12:02  Japan pop 16 0.016018,604
 37  A*02:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01495,266
 38  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*21:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01165,266
 39  A*24:02:01-B*39:01:01-C*03:04:01-DRB1*12:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01165,266
 40  A*11:01-B*39:01-C*04:03-DRB1*12:02  Hong Kong Chinese BMDR 0.01137,595
 41  A*33:03-B*39:01-C*07:02-DRB1*12:02  Hong Kong Chinese BMDR 0.01117,595
 42  A*02:03-B*39:01-C*03:03-DRB1*12:02-DQB1*03:01  USA Asian pop 2 0.01101,772
 43  A*26:01-B*39:01-C*03:03-DRB1*12:02-DQB1*03:01  USA Asian pop 2 0.01101,772
 44  A*02:06:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01035,266
 45  A*02:07:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*135:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00955,266
 46  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*13:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00935,266
 47  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*135:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00885,266
 48  A*24:02:01-B*39:01:22-C*07:02:01-DRB1*12:02:01-DPB1*04:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00875,266
 49  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*135:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00865,266
 50  A*26:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00865,266
 51  A*68:01-B*39:01-C*12:03-DRB1*12:02-DQB1*03:01  India West UCBB 0.00865,829
 52  A*02:06:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00855,266
 53  A*02:01-B*39:01-C*03:03-DRB1*12:02  Hong Kong Chinese BMDR 0.00817,595
 54  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.00785,266
 55  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00735,266
 56  A*30:01-B*39:01-C*06:02-DRB1*12:02  Hong Kong Chinese BMDR 0.00617,595
 57  A*11:01-B*39:01-C*07:02-DRB1*12:02  Japan pop 16 0.005018,604
 58  A*02:01-B*39:01-C*07:02-DRB1*12:02-DQB1*03:01  India South UCBB 0.004411,446
 59  A*26:01-B*39:01-C*07:02-DRB1*12:02  Hong Kong Chinese BMDR 0.00337,595

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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