Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 100 (from 166) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*02-B*48-DRB1*08:04-DQB1*04:02  Peru Lamas City Lama 7.800083
 2  A*02-B*48-DRB1*08:02-DQB1*04:02  Bolivia La Paz Aymaras 5.187087
 3  A*24:02-B*48:01-DRB1*08:02-DQB1*04:02  USA Alaska Yupik 3.8000252
 4  A*24:02:01-B*48:01-C*08:01-DRB1*08:02:01-DQB1*04:02-DPB1*04:01  Mexico Chihuahua Tarahumara 3.400044
 5  A*31-B*48-DRB1*08-DQB1*04  Mexico Mexico City West 2.941233
 6  A*68-B*48-DRB1*08-DQB1*04  Mexico Jalisco, Tlaquepaque 2.564139
 7  A*02-B*48-DRB1*08-DQB1*04  Mexico Guanajuato, Guanajuato city 2.272722
 8  A*02-B*48-DRB1*08-DQB1*04  Mexico Veracruz, Veracruz city 2.0349171
 9  A*02-B*48-DRB1*08-DQB1*04  Mexico Baja California Rural 2.000050
 10  A*24-B*48-DRB1*08-DQB1*04  Mexico Baja California, Tijuana 2.000025
 11  A*68-B*48-DRB1*08-DQB1*04  Mexico Mexico City South 1.923152
 12  A*68-B*48-DRB1*08-DQB1*04  Mexico Chihuahua, Ciudad Juarez 1.8519106
 13  A*68-B*48-DRB1*08-DQB1*04  Mexico Hidalgo Rural 1.851981
 14  A*02:01-B*48:01-DRB1*08:02-DQB1*04:02  Peru Titikaka Lake Uros 1.7900105
 15  A*02-B*48-DRB1*08-DQB1*04  Mexico Nuevo Leon, Monterrey city 1.7699226
 16  B*48:01-C*08:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 1.7100234
 17  A*24-B*48-DRB1*08-DQB1*04  Mexico Jalisco, Tlajomulco 1.666730
 18  A*68-B*48-DRB1*08-DQB1*04  Mexico Morelos Rural 1.666730
 19  A*68-B*48-DRB1*08-DQB1*04  Mexico Tlaxcala, Tlaxcala city 1.6575181
 20  A*02-B*48-DRB1*08:02-DQB1*04:02  Bolivia Quechua 1.520069
 21  A*02-B*48-DRB1*08-DQB1*04  Mexico Mexico City West 1.470633
 22  A*68-B*48-DRB1*08:02-DQB1*04:02  Bolivia Quechua 1.450069
 23  A*68-B*48-DRB1*08-DQB1*04  Ecuador Amazonia Mixed Ancestry 1.282139
 24  A*02-B*48-DRB1*08-DQB1*04  Mexico Hidalgo, Pachuca 1.219541
 25  A*02-B*48-DRB1*08-DQB1*04  Mexico Queretaro Rural 1.162843
 26  A*02-B*48-DRB1*08-DQB1*04  Mexico San Luis Potosi Rural 1.149487
 27  A*02-B*48-DRB1*08-DQB1*04  Mexico Zacatecas Rural 1.1152266
 28  A*68-B*48-DRB1*08-DQB1*04  Mexico Campeche Rural 1.063847
 29  A*02-B*48-DRB1*08-DQB1*04  Mexico Quintana Roo, Cancun 1.041748
 30  A*24-B*48-DRB1*08-DQB1*04  Mexico Quintana Roo Rural 1.000050
 31  A*68-B*48-DRB1*08-DQB1*04  Mexico Baja California Rural 1.000050
 32  A*02-B*48-DRB1*08-DQB1*04  Mexico Mexico City North 0.9960751
 33  A*24-B*48-DRB1*08-DQB1*04  Mexico Mexico City Center 0.9740152
 34  A*68-B*48-DRB1*08-DQB1*04  Mexico Chiapas Rural 0.8264121
 35  A*31-B*48-DRB1*08-DQB1*04  Mexico Colima, Colima city 0.819761
 36  A*68-B*48-DRB1*08-DQB1*04  Mexico Mexico City North 0.7968751
 37  A*02-B*48-DRB1*08-DQB1*04  Mexico Nayarit Rural 0.781264
 38  A*68-B*48-DRB1*08-DQB1*04  Mexico Nayarit Rural 0.781264
 39  A*02-B*48-DRB1*08-DQB1*04  Mexico Michoacan Rural 0.7163348
 40  A*02-B*48-DRB1*08-DQB1*04  Mexico Tabasco Rural 0.7042142
 41  B*48:01-C*08:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.6993143
 42  A*02:01:01-B*48:01:01-C*08:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 43  A*03:01:01-B*48:01:01-C*08:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 44  A*68:01:01-B*48:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 45  A*68:01:01-B*48:01:01-C*08:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 46  A*68:03:01-B*48:01:01-C*04:01:01-DRB1*08:02:01-DQB1*04:02  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 47  A*02-B*48-DRB1*08-DQB1*04  Mexico Coahuila, Saltillo 0.684972
 48  A*24-B*48-DRB1*08-DQB1*04  Mexico Baja California, La Paz 0.666775
 49  A*24-B*48-DRB1*08-DQB1*04  Mexico Michoacan, Morelia 0.6623150
 50  A*68-B*48-DRB1*08-DQB1*04  Mexico Oaxaca, Oaxaca city 0.6623151
 51  A*02-B*48-DRB1*08-DQB1*04  Mexico Puebla, Puebla city 0.65131,994
 52  A*68-B*48-DRB1*08-DQB1*04  Mexico Mexico City Center 0.6494152
 53  A*02:01-B*48:01-C*08:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.6410234
 54  A*02:06-B*48:01-C*08:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.6410234
 55  A*02-B*48-DRB1*08-DQB1*04  Mexico Guanajuato, Leon 0.641078
 56  A*02-B*48-DRB1*08-DQB1*04  Mexico Chihuahua Rural 0.6276236
 57  A*02-B*48-DRB1*08-DQB1*04  Mexico Hidalgo Rural 0.617381
 58  A*02-B*48-DRB1*08-DQB1*04  Mexico Guanajuato Rural 0.6135162
 59  A*02-B*48-DRB1*08-DQB1*04  Mexico Morelos, Cuernavaca 0.609882
 60  A*02-B*48-DRB1*08-DQB1*04  Mexico Tlaxcala Rural 0.6024830
 61  A*24-B*48-DRB1*08-DQB1*04  Mexico Tlaxcala Rural 0.6024830
 62  A*02-B*48-DRB1*08-DQB1*04  Mexico Puebla Rural 0.5995833
 63  A*68:01-B*48:01-DRB1*08:02-DQB1*04:02  Mexico Veracruz Xalapa 0.595284
 64  A*68-B*48-DRB1*08-DQB1*04  Mexico Nuevo Leon Rural 0.5682439
 65  A*68-B*48-DRB1*08-DQB1*04  Mexico Zacatecas Rural 0.5576266
 66  A*68-B*48-DRB1*08-DQB1*04  Mexico Veracruz Rural 0.5545539
 67  A*02-B*48-DRB1*08-DQB1*04  Mexico Veracruz, Xalapa 0.5348187
 68  A*68-B*48-DRB1*08-DQB1*04  Mexico Aguascalientes state 0.526395
 69  A*02-B*48-DRB1*08-DQB1*04  Mexico Sonora Rural 0.5076197
 70  A*68-B*48-DRB1*08-DQB1*04  Mexico Sonora, Hermosillo 0.505199
 71  A*02-B*48-DRB1*08-DQB1*04  Mexico Baja Californa, Mexicali 0.5000100
 72  A*31-B*48-DRB1*08-DQB1*04  Mexico Sinaloa, Culiacán 0.4854103
 73  A*24-B*48-DRB1*08-DQB1*04  Mexico Zacatecas, Fresnillo 0.4762103
 74  A*24-B*48-DRB1*08-DQB1*04  Mexico Chihuahua, Ciudad Juarez 0.4630106
 75  A*02-B*48-DRB1*08-DQB1*04  Mexico Coahuila Rural 0.4587216
 76  A*24-B*48-DRB1*08-DQB1*04  Mexico Coahuila Rural 0.4587216
 77  A*02-B*48-DRB1*08-DQB1*04  Mexico Nuevo Leon Rural 0.4545439
 78  B*48:01-C*08:03-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4300234
 79  A*24-B*48-DRB1*08-DQB1*04  Mexico Michoacan Rural 0.4298348
 80  A*02:01-B*48:01-C*08:03-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4274234
 81  A*68-B*48-DRB1*08-DQB1*04  Mexico Tlaxcala Rural 0.4217830
 82  A*02-B*48-DRB1*08-DQB1*04  Mexico Jalisco, Guadalajara city 0.41881,189
 83  A*02-B*48-DRB1*08-DQB1*04  Mexico Chiapas Rural 0.4132121
 84  A*02-B*48-DRB1*08-DQB1*04  Mexico Tamaulipas Rural 0.3968125
 85  A*68-B*48-DRB1*08-DQB1*04  Mexico Tamaulipas Rural 0.3968125
 86  A*68-B*48-DRB1*08-DQB1*04  Mexico Yucatan Rural 0.3731132
 87  A*02:01-B*48:01-C*08:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 88  A*02:06-B*48:03-C*08:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 89  A*02-B*48-DRB1*08-DQB1*04  Mexico Sonora, Ciudad Obregón 0.3497143
 90  A*31:01-B*48:01-C*08:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 91  B*48:01-C*08:03-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 92  B*48:03-C*08:01-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 93  A*02-B*48-DRB1*08-DQB1*04  Mexico Guerrero state 0.3472144
 94  A*24-B*48-C*08:01-DRB1*08:01-DQB1*04  Russia Transbaikal Territory Buryats 0.3340150
 95  A*24-B*48-DRB1*08-DQB1*04  Mexico Oaxaca, Oaxaca city 0.3311151
 96  A*68-B*48-DRB1*08-DQB1*04  Mexico Puebla, Puebla city 0.32571,994
 97  A*02-B*48-DRB1*08-DQB1*04  Mexico Mexico City Center 0.3247152
 98  A*02-B*48-DRB1*08-DQB1*04  Mexico Durango, Durango city 0.3226153
 99  A*68-B*48-DRB1*08-DQB1*04  Mexico Guanajuato Rural 0.3067162
 100  A*68-B*48-DRB1*08-DQB1*04  Mexico Puebla Rural 0.2998833

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 166) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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