Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Population:  Country:  Source of dataset : 
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Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 62 (from 62) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*24:02-B*54:01-C*03:03-DRB1*09:01-DQA1*03:01-DQB1*03:03-DPB1*02:01  USA San Diego 0.5210496
 2  A*02:01:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DQB1*03:03:02  Vietnam Kinh 0.4950101
 3  A*68:01:02:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DQB1*05:03:01  Russia Bashkortostan, Bashkirs 0.4167120
 4  A*24:02-B*54:01-DRB1*09:01  Hong Kong Chinese cord blood registry 0.18903,892
 5  A*24:02-B*54:01-C*01:02-DRB1*09:01  Germany DKMS - China minority 0.18201,282
 6  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.14761,734
 7  A*24:02-B*54:01-C*01:02-DRB1*09:01  Japan pop 16 0.141018,604
 8  A*11:01:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.11821,734
 9  A*11:01-B*54:01-C*01:02-DRB1*09:01  Hong Kong Chinese BMDR 0.10657,595
 10  A*24:02-B*54:01-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.10357,595
 11  A*24:02-B*54:01-C*01:02-DRB1*09:01  Hong Kong Chinese BMDR 0.09767,595
 12  A*11:01-B*54:01-DRB1*09:01  Hong Kong Chinese cord blood registry 0.09503,892
 13  A*24:02:01-B*54:01:01-C*08:01:01-DRB1*09:01:02-DPB1*135:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.06415,266
 14  A*11:01:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.05505,266
 15  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.04895,266
 16  A*33:03-B*54:01-DRB1*09:01  Hong Kong Chinese cord blood registry 0.04673,892
 17  A*11:01-B*54:01-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.04367,595
 18  A*11:01-B*54:01-C*01:02-DRB1*09:01  Japan pop 16 0.042018,604
 19  A*11:01-B*54:01-C*01:02-DRB1*09:01  Germany DKMS - China minority 0.04001,282
 20  A*02:01:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03235,266
 21  A*11:01-B*54:01-C*01:02-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 22  A*24:02-B*54:01-C*01:02-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 23  A*24:02-B*54:01-C*01:02-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*05:01  Japan pop 17 0.03003,078
 24  A*24:02-B*54:01-C*01:02-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:01-DPB1*05:01  Japan pop 17 0.03003,078
 25  A*24:02-B*54:01-C*01:02-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:01-DPB1*13:01  Japan pop 17 0.03003,078
 26  A*26:02-B*54:01-C*01:02-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 27  A*26:03-B*54:01-C*01:02-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 28  A*31:01-B*54:01-C*01:02-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 29  A*31:01:02-B*54:01:01-C*01:02:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.02981,734
 30  A*11:01:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02935,266
 31  A*11:02:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DQB1*05:03:01  China Zhejiang Han 0.02881,734
 32  A*11:02-B*54:01-C*01:02-DRB1*09:01  Hong Kong Chinese BMDR 0.02557,595
 33  A*33:03:01-B*54:01:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02545,266
 34  A*11:02:01-B*54:01:01-C*07:02:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02255,266
 35  A*26:01-B*54:01-C*01:02-DRB1*09:01  Japan pop 16 0.021018,604
 36  A*11:01-B*54:01-C*07:02-DRB1*09:01  Hong Kong Chinese BMDR 0.02037,595
 37  A*02:03-B*54:01-DRB1*09:01  Hong Kong Chinese cord blood registry 0.01923,892
 38  A*24:02:01-B*54:01:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01885,266
 39  A*11:01:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.01875,266
 40  A*31:01-B*54:01-C*01:02-DRB1*09:01  Japan pop 16 0.016018,604
 41  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DPB1*135:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01415,266
 42  A*33:03-B*54:01-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.01307,595
 43  A*02:01-B*54:01-DRB1*09:01  Hong Kong Chinese cord blood registry 0.01283,892
 44  A*02:01-B*54:01-C*01:02-DRB1*09:01  Hong Kong Chinese BMDR 0.01267,595
 45  A*02:03-B*54:01-C*01:02-DRB1*09:01  Hong Kong Chinese BMDR 0.01207,595
 46  A*24:02-B*54:01-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.01101,772
 47  A*33:03-B*54:01-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.01101,772
 48  A*02:06-B*54:01-C*01:02-DRB1*09:01  Japan pop 16 0.010018,604
 49  A*02:07:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00995,266
 50  A*31:01-B*54:01-C*01:02-DRB1*09:01  Hong Kong Chinese BMDR 0.00987,595
 51  A*24:02:01-B*54:01:01-C*08:01:01-DRB1*09:01:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.00955,266
 52  A*02:06:01-B*54:01:01-C*08:01:01-DRB1*09:01:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.00945,266
 53  A*02:07:01-B*54:01:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00895,266
 54  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DPB1*13:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00665,266
 55  A*24:02:01-B*54:01:01-C*07:02:01-DRB1*09:01:02-DPB1*135:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00605,266
 56  A*02:06:01-B*54:01:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00585,266
 57  A*33:03:01-B*54:01:01-C*01:02:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00585,266
 58  A*02:01:01-B*54:01:01-C*03:04:01-DRB1*09:01:02-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00505,266
 59  A*02:01-B*54:01-C*01:02-DRB1*09:01  Japan pop 16 0.005018,604
 60  A*26:02-B*54:01-C*01:02-DRB1*09:01  Japan pop 16 0.005018,604
 61  A*31:01-B*54:01-C*03:03-DRB1*09:01  Japan pop 16 0.005018,604
 62  A*33:03-B*54:01-C*01:02-DRB1*09:01  Japan pop 16 0.005018,604

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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