Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

Please specify your search by selecting options from boxes. Then, click "Search" to find HLA Haplotype frequencies that match your criteria. Remember at least one option must be selected.
A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 71 (from 71) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 11.940367
 2  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 5.5944143
 3  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 4.0600234
 4  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 3.4404218
 5  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 6  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.7483143
 7  A*68:03-B*39:05-C*07:02-DRB1*04:07  USA Mexican American Mestizo 1.6000553
 8  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.3986143
 9  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.2800234
 10  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 1.1468218
 11  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 12  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 13  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 14  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 15  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 1.0523261,235
 16  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 17  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 18  A*68:05-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Amerindians (G) 0.8065125
 19  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.74801,999
 20  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 21  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 0.6700261,235
 22  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.6494339
 23  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.5534146,714
 24  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.46501,999
 25  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 26  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*03:01  Mexico Chiapas Lacandon Mayans 0.4587218
 27  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 28  A*02:11:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 29  A*68:03:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 30  A*31:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 31  A*31:01:02-B*39:05:01-C*07:02:01-DRB1*04:07  Nicaragua Mestizo (G) 0.3226155
 32  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.28361,463
 33  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:01  USA NMDP Hawaiian or other Pacific Islander 0.275911,499
 34  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.2584146,714
 35  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.23791,463
 36  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 37  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 38  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.2294218
 39  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*14:01  Mexico Chiapas Lacandon Mayans 0.2294218
 40  A*31:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 41  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:11-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 42  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*14:01  Mexico Chiapas Lacandon Mayans 0.2294218
 43  A*31:01:02-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.2262221
 44  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*05:01-DQB1*03:01-DPB1*04:02  Nicaragua Managua 0.2165339
 45  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.16555,926
 46  A*01:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.13401,999
 47  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Caribean Hispanic 0.0774115,374
 48  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Caribean Hispanic 0.0732115,374
 49  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*02:01  Costa Rica Central Valley Mestizo (G) 0.0702221
 50  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*06:03  Costa Rica Central Valley Mestizo (G) 0.0702221
 51  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.05301,999
 52  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04901,999
 53  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 54  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.0468221
 55  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.04131,463
 56  A*26:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 57  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP North American Amerindian 0.025135,791
 58  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.0208221
 59  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 0.0182221
 60  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Filipino 0.009750,614
 61  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP North American Amerindian 0.009135,791
 62  A*68:01-B*39:05-C*07:02-DRB1*04:07  Japan pop 16 0.005018,604
 63  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP African American pop 2 0.0018416,581
 64  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Caribean Black 0.001733,328
 65  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Filipino 0.001350,614
 66  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP European Caucasian 0.00121,242,890
 67  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Middle Eastern or North Coast of Africa 0.001170,890
 68  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP European Caucasian 0.00066271,242,890
 69  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Chinese 0.000567099,672
 70  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Middle Eastern or North Coast of Africa 0.000258070,890
 71  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP African American pop 2 0.0000790416,581

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

support@allelefrequencies.net

Valid XHTML 1.0 Transitional