Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 90 (from 90) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*40:06-C*08:01-DRB1*09:01  South Korea pop 3 1.9000485
 2  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  South Korea pop 3 1.0000485
 3  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03-DPB1*05:01  Japan Central 1.0000371
 4  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Japanese 0.859024,582
 5  A*24:02-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.709018,604
 6  A*24:02:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.69911,734
 7  A*26:02-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.542018,604
 8  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Korean 0.470077,584
 9  A*02:06-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.464018,604
 10  A*24:02-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.46001,282
 11  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.39003,078
 12  A*02:06-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.36601,282
 13  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.36003,078
 14  A*02:01-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.27301,282
 15  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  Malaysia Peninsular Chinese 0.2577194
 16  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.23003,078
 17  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Chinese 0.214399,672
 18  A*02:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.214018,604
 19  A*11:01-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.19801,282
 20  A*11:01:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.18821,734
 21  A*02:01:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.18301,734
 22  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.17801,772
 23  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.16003,078
 24  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.16003,078
 25  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.15701,772
 26  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Vietnamese 0.141743,540
 27  A*11:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.14101,772
 28  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.13003,078
 29  A*31:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.115018,604
 30  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.11401,772
 31  A*24:02-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.10327,595
 32  A*02:06:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.09611,734
 33  A*11:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.083018,604
 34  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 35  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 36  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQA1*03:01-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 37  A*11:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 38  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*04:02  Japan pop 17 0.07003,078
 39  A*26:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 40  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*19:01  Japan pop 17 0.07003,078
 41  A*31:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 42  A*33:03-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 43  A*02:01-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.06987,595
 44  A*26:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.063018,604
 45  A*33:03-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.06301,772
 46  A*11:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  Malaysia Peninsular Malay 0.0526951
 47  A*11:01-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.04557,595
 48  A*24:02:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.04415,266
 49  A*30:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.04401,772
 50  A*24:02:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.04075,266
 51  A*31:01-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.04001,282
 52  A*02:06:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03815,266
 53  A*02:06-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.03607,595
 54  A*02:10-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.031018,604
 55  A*31:01:02-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.03041,734
 56  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 57  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*02:01  Japan pop 17 0.03003,078
 58  A*02:10-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 59  A*11:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 60  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*01:01-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 61  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:01-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 62  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*05:01  Japan pop 17 0.03003,078
 63  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*02:01  Japan pop 17 0.03003,078
 64  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:01-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 65  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*03:01  Japan pop 17 0.03003,078
 66  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 67  A*31:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 68  A*31:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*05:01  Japan pop 17 0.03003,078
 69  A*33:03-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 70  A*24:02:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 71  A*26:01:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.02881,734
 72  A*31:01-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.02227,595
 73  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  India East UCBB 0.02082,403
 74  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Filipino 0.018050,614
 75  A*02:06:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.01645,266
 76  A*02:07-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.016018,604
 77  A*26:01-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.01447,595
 78  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  India Central UCBB 0.01194,204
 79  A*24:20-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.010018,604
 80  A*33:03-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.010018,604
 81  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  India West UCBB 0.00865,829
 82  A*11:01:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00855,266
 83  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  India North UCBB 0.00855,849
 84  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Southeast Asian 0.006727,978
 85  A*01:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.005018,604
 86  A*24:46-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.005018,604
 87  A*26:03-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.005018,604
 88  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP North American Amerindian 0.001435,791
 89  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Hispanic South or Central American 0.0008220146,714
 90  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP European Caucasian 0.00018831,242,890

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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