Line |
Haplotype |
Population |
Frequency (%) |
Sample Size |
Distribution¹ |
1,001 | A*25-B*39-C*07-DRB1*08-DQA1*04-DQB1*04 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,002 | A*31:01:02-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01 | | Mexico Hidalgo Mezquital Valley/ Otomi | 0.6944 | | 72 |
|
1,003 | A*31:01:02-B*39:06:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02 | | Mexico Hidalgo Mezquital Valley/ Otomi | 0.6944 | | 72 |
|
1,004 | A*31-B*39-DRB1*04-DQB1*03:02 | | Mexico Guerrero state | 0.6944 | | 144 |
|
1,005 | A*66:01-B*39:10-C*12:03-DRB1*07:01 | | Brazil Vale do Ribeira Quilombos | 0.6944 | | 144 |
|
1,006 | A*68:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01 | | Mexico Hidalgo Mezquital Valley/ Otomi | 0.6944 | | 72 |
|
1,007 | A*68:01:01-B*39:01:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02 | | Mexico Hidalgo Mezquital Valley/ Otomi | 0.6944 | | 72 |
|
1,008 | A*68:01:01-B*39:01:01-C*07:01:01-DRB1*16:02:01-DQB1*03:01:01 | | Mexico Hidalgo Mezquital Valley/ Otomi | 0.6944 | | 72 |
|
1,009 | A*68:01:01-B*39:02:01-C*07:01:01-DRB1*08:02:01-DQB1*04:02 | | Mexico Hidalgo Mezquital Valley/ Otomi | 0.6944 | | 72 |
|
1,010 | A*68-B*39-C*03-DRB1*07-DQA1*02-DQB1*02 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,011 | A*68-B*39-C*07-DRB1*09-DQA1*03-DQB1*03 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,012 | A*68-B*39-C*07-DRB1*13-DQA1*01-DQB1*06 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,013 | B*39-C*03 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,014 | B*39-C*03-DRB1*07-DQA1*02-DQB1*02 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,015 | B*39-C*07-DRB1*04-DQA1*01-DQB1*06 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,016 | B*39-C*07-DRB1*09-DQA1*03-DQB1*03 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,017 | B*39-C*07-DRB1*11-DQA1*05-DQB1*03 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,018 | B*39-C*07-DRB1*13-DQA1*01-DQB1*05 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,019 | B*39-C*12 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,020 | B*39-C*12-DRB1*04-DQA1*03-DQB1*03 | | Mexico Tapachula, Chiapas Mestizo Population | 0.6944 | | 72 |
|
1,021 | A*68-B*39-DRB1*08:02-DQB1*04:02 | | Bolivia La Paz Aymaras | 0.6920 | | 87 |
|
1,022 | A*02-B*39-DRB1*16-DQB1*03:01 | | Mexico Coahuila Rural | 0.6881 | | 216 |
|
1,023 | A*24:02-B*39:06-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | | Mexico Chiapas Lacandon Mayans | 0.6881 | | 218 |
|
1,024 | A*24-B*39-DRB1*04-DQB1*03:02 | | Mexico Coahuila Rural | 0.6881 | | 216 |
|
1,025 | A*68:01-B*39:01-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | | Mexico Chiapas Lacandon Mayans | 0.6881 | | 218 |
|
1,026 | A*68:01-B*39:05-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02 | | Mexico Chiapas Lacandon Mayans | 0.6881 | | 218 |
|
1,027 | A*68-B*39-DRB1*04-DQB1*03:02 | | Mexico Coahuila Rural | 0.6881 | | 216 |
|
1,028 | A*68-B*39-DRB1*08-DQB1*04 | | Mexico Coahuila Rural | 0.6881 | | 216 |
|
1,029 | B*39:10-C*12:03 | | USA African American pop 4 | 0.6860 | | 2,411 |
|
1,030 | A*11-B*39-DRB1*14-DQB1*03:01 | | Mexico Coahuila, Saltillo | 0.6849 | | 72 |
|
1,031 | A*24-B*39-DRB1*14-DQB1*03:01 | | Mexico Coahuila, Saltillo | 0.6849 | | 72 |
|
1,032 | A*31-B*39-DRB1*08-DQB1*04 | | Mexico Coahuila, Saltillo | 0.6849 | | 72 |
|
1,033 | A*68-B*39-DRB1*04-DQB1*03:02 | | Mexico Coahuila, Saltillo | 0.6849 | | 72 |
|
1,034 | A*02-B*39-DRB1*08-DQB1*04 | | Mexico Nuevo Leon Rural | 0.6818 | | 439 |
|
1,035 | A*02-B*39-DRB1*14-DQB1*03:01 | | Mexico Nuevo Leon Rural | 0.6818 | | 439 |
|
1,036 | A*32-B*39-C*12-DRB1*11-DQB1*03 | | Albania pop 2 | 0.6800 | | 432 |
|
1,037 | A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02 | | USA NMDP Mexican or Chicano | 0.6700 | | 261,235 |
|
1,038 | A*24-B*39-DRB1*13-DQB1*02 | | Iraq Arabs | 0.6700 | | 149 |
|
1,039 | A*02:01-B*39:04-C*07:01-DRB1*04:11-DQA1*03:01-DQB1*03:02 | | Brazil Puyanawa | 0.6667 | | 150 |
|
1,040 | A*31:01-B*39:05-C*08:03-DRB1*16:02-DQA1*01:02-DQB1*03:02 | | Brazil Puyanawa | 0.6667 | | 150 |
|
1,041 | A*31-B*39-DRB1*08-DQB1*04 | | Mexico Baja California, La Paz | 0.6667 | | 75 |
|
1,042 | A*68-B*39-DRB1*04-DQB1*03:02 | | Mexico Baja California, La Paz | 0.6667 | | 75 |
|
1,043 | A*02-B*39-DRB1*16-DQB1*03:01 | | Mexico Mexico City North | 0.6640 | | 751 |
|
1,044 | A*68-B*39-DRB1*14-DQB1*03:01 | | Mexico Mexico City North | 0.6640 | | 751 |
|
1,045 | A*02-B*39-DRB1*04-DQB1*03:01 | | Mexico Nuevo Leon, Monterrey city | 0.6637 | | 226 |
|
1,046 | A*02-B*39-DRB1*04-DQB1*04 | | Mexico Nuevo Leon, Monterrey city | 0.6637 | | 226 |
|
1,047 | A*68-B*39-DRB1*08-DQB1*04 | | Mexico Nuevo Leon, Monterrey city | 0.6637 | | 226 |
|
1,048 | A*02-B*39-DRB1*11-DQB1*03:01 | | Mexico Oaxaca, Oaxaca city | 0.6623 | | 151 |
|
1,049 | A*24-B*39-DRB1*16-DQB1*05 | | Mexico Oaxaca, Oaxaca city | 0.6623 | | 151 |
|
1,050 | A*31-B*39-DRB1*08-DQB1*04 | | Mexico Oaxaca, Oaxaca city | 0.6623 | | 151 |
|
1,051 | A*31-B*39-DRB1*14-DQB1*03:01 | | Mexico Michoacan, Morelia | 0.6623 | | 150 |
|
1,052 | A*68-B*39-DRB1*08-DQB1*04 | | Mexico Michoacan, Morelia | 0.6623 | | 150 |
|
1,053 | A*68:03-B*39:05 | | USA Hispanic pop 2 | 0.6620 | | 1,999 |
|
1,054 | A*68-B*39-DRB1*16-DQB1*03:01 | | Mexico Puebla Rural | 0.6595 | | 833 |
|
1,055 | A*02-B*39-DRB1*14-DQB1*03:01 | | Mexico Mexico City Metropolitan Area Rural | 0.6579 | | 150 |
|
1,056 | A*31-B*39-C*07-DRB1*11 | | Macedonia MBMDR - Macedonian Muslims | 0.6579 | | 76 |
|
1,057 | A*32-B*39-C*07-DRB1*11 | | Macedonia MBMDR - Macedonian Muslims | 0.6579 | | 76 |
|
1,058 | A*68-B*39-DRB1*03:01-DQB1*02 | | Mexico Mexico City Metropolitan Area Rural | 0.6579 | | 150 |
|
1,059 | A*68-B*39-DRB1*07-DQB1*02 | | Mexico Mexico City Metropolitan Area Rural | 0.6579 | | 150 |
|
1,060 | A*11:01-B*39:01 | | USA Asian pop 2 | 0.6540 | | 1,772 |
|
1,061 | A*02-B*39-DRB1*16:02 | | Chile Santiago | 0.6505 | | 920 |
|
1,062 | A*68-B*39-DRB1*16-DQB1*03:01 | | Mexico Mexico City Center | 0.6494 | | 152 |
|
1,063 | A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02 | | Nicaragua Managua | 0.6494 | | 339 |
|
1,064 | A*31-B*39-DRB1*16 | | Brazil Para Cord Blood Unit | 0.6491 | | 841 |
|
1,065 | A*68-B*39-DRB1*16-DQB1*03:01 | | Mexico Veracruz Rural | 0.6470 | | 539 |
|
1,066 | A*24-B*39-DRB1*04-DQB1*03:02 | | Mexico Durango, Durango city | 0.6452 | | 153 |
|
1,067 | A*24:02:01-B*39:02:02-C*03:04:01-DRB1*04:07 | | Nicaragua Mestizo (G) | 0.6452 | | 155 |
|
1,068 | A*24:02:01-B*39:06:02-C*07:02:01-DRB1*03:01 | | Nicaragua Mestizo (G) | 0.6452 | | 155 |
|
1,069 | A*02-B*39-DRB1*11-DQB1*03:01 | | Mexico Guanajuato, Leon | 0.6410 | | 78 |
|
1,070 | A*02-B*39-DRB1*16-DQB1*03:03 | | Mexico Guanajuato, Leon | 0.6410 | | 78 |
|
1,071 | A*03-B*39-DRB1*07-DQB1*02 | | Mexico Guanajuato, Leon | 0.6410 | | 78 |
|
1,072 | A*03-B*39-DRB1*11-DQB1*03:01 | | Mexico Guanajuato, Leon | 0.6410 | | 78 |
|
1,073 | A*31-B*39-DRB1*04-DQB1*03:02 | | Mexico Guanajuato, Leon | 0.6410 | | 78 |
|
1,074 | A*68-B*39-DRB1*01-DQB1*05 | | Mexico Guanajuato, Leon | 0.6410 | | 78 |
|
1,075 | A*68-B*39-DRB1*08-DQB1*04 | | Mexico Guanajuato, Leon | 0.6410 | | 78 |
|
1,076 | A*68-B*39-DRB1*14-DQB1*03:01 | | Mexico Guanajuato, Leon | 0.6410 | | 78 |
|
1,077 | B*39:05-C*07:02-DRB1*14:02-DQB1*03:01 | | Mexico Mexico City Mestizo pop 2 | 0.6400 | | 234 |
|
1,078 | B*39:05-C*07:02-DRB1*16:02-DQB1*03:01 | | Mexico Mexico City Mestizo pop 2 | 0.6400 | | 234 |
|
1,079 | B*39:08-C*07:02 | | Mexico Mexico City Mestizo pop 2 | 0.6400 | | 234 |
|
1,080 | A*02-B*39-DRB1*08-DQB1*04 | | Ecuador Mixed Ancestry | 0.6394 | | 1,173 |
|
1,081 | A*02:06-B*39:05 | | USA Hispanic pop 2 | 0.6360 | | 1,999 |
|
1,082 | A*24-B*39-DRB1*08-DQB1*04 | | Ecuador Coast Mixed Ancestry | 0.6303 | | 238 |
|
1,083 | A*31-B*39-DRB1*04-DQB1*03:02 | | Ecuador Coast Mixed Ancestry | 0.6303 | | 238 |
|
1,084 | A*31-B*39-DRB1*14-DQB1*03:01 | | Ecuador Coast Mixed Ancestry | 0.6303 | | 238 |
|
1,085 | A*31-B*39-DRB1*04 | | Brazil Para State | 0.6300 | | 5,000 |
|
1,086 | A*02-B*39-DRB1*04-DQB1*03:02 | | Mexico Chihuahua Rural | 0.6276 | | 236 |
|
1,087 | A*24-B*39-DRB1*04-DQB1*03:02 | | Mexico Chihuahua Rural | 0.6276 | | 236 |
|
1,088 | A*24-B*39-DRB1*14-DQB1*03:01 | | Mexico Chihuahua Rural | 0.6276 | | 236 |
|
1,089 | A*31-B*39-DRB1*04-DQB1*03:02 | | Mexico Chihuahua Rural | 0.6276 | | 236 |
|
1,090 | A*68-B*39-DRB1*08-DQB1*04 | | Mexico Chihuahua Rural | 0.6276 | | 236 |
|
1,091 | A*31-B*39-DRB1*14 | | Brazil Para Cord Blood Unit | 0.6270 | | 841 |
|
1,092 | A*02-B*39-DRB1*08-DQB1*04 | | Mexico Mexico City East | 0.6250 | | 79 |
|
1,093 | A*02-B*39-DRB1*16-DQB1*03:01 | | Mexico Mexico City East | 0.6250 | | 79 |
|
1,094 | A*26-B*39-DRB1*04-DQB1*04 | | Mexico Mexico City East | 0.6250 | | 79 |
|
1,095 | A*30-B*39-DRB1*01-DQB1*05 | | Mexico Mexico City East | 0.6250 | | 79 |
|
1,096 | A*31-B*39-DRB1*14-DQB1*03:01 | | Mexico Coahuila, Torreon | 0.6250 | | 396 |
|
1,097 | A*68-B*39-DRB1*04-DQB1*03:03 | | Mexico Mexico City East | 0.6250 | | 79 |
|
1,098 | A*68-B*39-DRB1*04-DQB1*04 | | Mexico Mexico City East | 0.6250 | | 79 |
|
1,099 | A*02-B*39-DRB1*11 | | Italy Lombardy | 0.6200 | | 674 |
|
1,100 | A*02-B*39-DRB1*08-DQB1*04 | | Mexico Hidalgo Rural | 0.6173 | | 81 |
|
* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).