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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*11:01:01-B*38:02:01-C*07:02:01-DRB1*15:02:01-DQB1*05:01:01 | Vietnam Kinh | 0.99 | 101 | 14_5_N_108_27_E |
| 2 | A*26:01-B*38:02-C*07:02-DRB1*15:02-DRB5*01:02-DQB1*05:01 | USA NMDP Vietnamese | 0.81 | 43,540 | 38_45_N_76_6_W |
| 3 | A*24:02-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | Malaysia Peninsular Malay | 0.58 | 951 | 3_9_N_101_57_E |
| 4 | A*02:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India East UCBB | 0.31 | 2,403 | 22_25_N_88_18_E |
| 5 | A*24:07-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | Malaysia Peninsular Malay | 0.26 | 951 | 3_9_N_101_57_E |
| 6 | A*11:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India Northeast UCBB | 0.17 | 296 | 26_16_N_91_48_E |
| 7 | A*24:02-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India Northeast UCBB | 0.17 | 296 | 26_16_N_91_48_E |
| 8 | A*33:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India East UCBB | 0.17 | 2,403 | 22_25_N_88_18_E |
| 9 | A*26:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | USA Asian pop 2 | 0.13 | 1,772 | 44_58_N_93_15_W |
| 10 | A*11:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | USA Asian pop 2 | 0.12 | 1,772 | 44_58_N_93_15_W |
| 11 | A*11:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | Malaysia Peninsular Malay | 0.11 | 951 | 3_9_N_101_57_E |
| 12 | A*02:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | USA Asian pop 2 | 0.11 | 1,772 | 44_58_N_93_15_W |
| 13 | A*02:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | Malaysia Peninsular Malay | 0.11 | 951 | 3_9_N_101_57_E |
| 14 | A*02:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India West UCBB | 0.09 | 5,829 | 19_11_N_73_3_E |
| 15 | A*02:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India Central UCBB | 0.08 | 4,204 | 27_1_N_81_19_E |
| 16 | A*02:16-B*38:02-C*07:02-DRB1*15:02-DQA1*01:01-DQB1*05:01-DPB1*02:01 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
| 17 | A*24:02-B*38:02-C*07:02-DRB1*15:02-DQA1*01:01-DQB1*05:01-DPB1*14:01 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
| 18 | A*33:03-B*38:02-C*07:02-DRB1*15:02-DQA1*01:01-DQB1*05:01-DPB1*04:01 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
| 19 | A*02:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India South UCBB | 0.07 | 11,446 | 13_6_N_80_8_E |
| 20 | A*34:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | Malaysia Peninsular Malay | 0.07 | 951 | 3_9_N_101_57_E |
| 21 | A*11:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India Tamil Nadu | 0.06 | 2,492 | 11_32_N_78_52_E |
| 22 | A*02:07:01-B*38:02:01-C*07:02:01-DRB1*15:02:01-DQB1*05:01:01 | China Zhejiang Han | 0.06 | 1,734 | 27_2_N_118_1_E |
| 23 | A*24:15-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | Malaysia Peninsular Malay | 0.05 | 951 | 3_9_N_101_57_E |
| 24 | A*02:02-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | Malaysia Peninsular Malay | 0.05 | 951 | 3_9_N_101_57_E |
| 25 | A*11:02-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 26 | A*25:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 27 | A*33:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 28 | A*11:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India East UCBB | 0.04 | 2,403 | 22_25_N_88_18_E |
| 29 | A*02:03-B*38:02-C*07:02-DRB1*15:02-DQA1*01:01-DQB1*05:01-DPA1*02:01-DPB1*13:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 30 | A*02:03:01-B*38:02:01-C*07:02:01-DRB1*15:02:01-DQB1*05:01:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 31 | A*02:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India North UCBB | 0.03 | 5,849 | 28_36_N_77_11_E |
| 32 | A*11:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India East UCBB | 0.02 | 2,403 | 22_25_N_88_18_E |
| 33 | A*02:11-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India Tamil Nadu | 0.01 | 2,492 | 11_32_N_78_52_E |
| 34 | A*02:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
| 35 | A*11:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
| 36 | A*32:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
| 37 | A*26:01-B*38:02-C*07:02-DRB1*15:02-DRB5*01:02-DQB1*05:01 | USA NMDP Southeast Asian | 0.01 | 27,978 | 38_45_N_76_6_W |
| 38 | A*11:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
| 39 | A*32:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
| 40 | A*26:01-B*38:02-C*07:02-DRB1*15:02-DRB5*01:02-DQB1*05:01 | USA NMDP Chinese | 0.00 | 99,672 | 38_45_N_76_6_W |
| 41 | A*26:01-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
| 42 | A*33:03-B*38:02-C*07:02-DRB1*15:02-DQB1*05:01 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
| 43 | A*26:01-B*38:02-C*07:02-DRB1*15:02-DRB5*01:02-DQB1*05:01 | USA NMDP South Asian Indian | 0.00 | 185,391 | 38_45_N_76_6_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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