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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 2 | A*02:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | Colombia North Wiwa El Encanto | 0.96 | 52 | 10_10_N_73_53_W |
| 3 | A*68:01-B*40:02-C*03:04-DRB1*04:03 | Russia Bering Island Aleuts | 0.48 | 104 | 55_0_N_166_15_E |
| 4 | B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | Mexico Mexico City Mestizo pop 2 | 0.43 | 234 | 19_26_N_99_8_W |
| 5 | A*31:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02-DPB1*04:02 | Panama | 0.38 | 462 | 8_59_N_79_37_W |
| 6 | A*02:06-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.33 | 1,376 | 38_45_N_76_6_W |
| 7 | A*02:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02 | Brazil Puyanawa | 0.33 | 150 | 10_52_S_53_5_W |
| 8 | A*68:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.28 | 1,376 | 38_45_N_76_6_W |
| 9 | A*68:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02 | USA San Diego | 0.26 | 496 | 32_50_N_117_15_W |
| 10 | A*26:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | Malaysia Peninsular Chinese | 0.26 | 194 | 3_9_N_101_57_E |
| 11 | A*31:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 12 | A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:01 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 13 | A*11:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | USA Asian pop 2 | 0.09 | 1,772 | 44_58_N_93_15_W |
| 14 | A*26:01-B*40:02-C*03:04-DRB1*04:03 | Japan pop 16 | 0.07 | 18,604 | 35_41_N_139_46_E |
| 15 | A*11:01-B*40:02-C*03:04-DRB1*04:03 | Hong Kong Chinese BMDR | 0.05 | 7,595 | 22_15_N_114_10_E |
| 16 | A*24:02-B*40:02-C*03:04-DRB1*04:03 | Japan pop 16 | 0.05 | 18,604 | 35_41_N_139_46_E |
| 17 | A*02:06-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 18 | A*29:02-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 19 | A*24:02-B*40:02-C*03:04-DRB1*04:03 | Hong Kong Chinese BMDR | 0.04 | 7,595 | 22_15_N_114_10_E |
| 20 | A*31:01-B*40:02-C*03:04-DRB1*04:03 | Japan pop 16 | 0.03 | 18,604 | 35_41_N_139_46_E |
| 21 | A*11:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 22 | A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*02:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 23 | A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 24 | A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*02:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 25 | A*26:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 26 | A*26:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 27 | A*31:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 28 | A*26:01-B*40:02-C*03:04-DRB1*04:03 | Germany DKMS - Austria minority | 0.03 | 1,698 | 48_31_N_9_3_E |
| 29 | A*11:01:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*48:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.03 | 5,266 | 22_25_N_114_17_E |
| 30 | A*11:01:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.03 | 5,266 | 22_25_N_114_17_E |
| 31 | A*11:01:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*14:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.03 | 5,266 | 22_25_N_114_17_E |
| 32 | A*02:03-B*40:02-C*03:04-DRB1*04:03 | Hong Kong Chinese BMDR | 0.02 | 7,595 | 22_15_N_114_10_E |
| 33 | A*26:01:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*48:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.02 | 5,266 | 22_25_N_114_17_E |
| 34 | A*26:01-B*40:02-C*03:04-DRB1*04:03 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 35 | A*24:02:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*14:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 36 | A*02:01-B*40:02-C*03:04-DRB1*04:03 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 37 | A*02:06-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 38 | A*24:02:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 39 | A*24:02-B*40:02-C*03:04-DRB1*04:03-DQB1*03:05 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
| 40 | A*24:02-B*40:02-C*03:04-DRB1*04:03-DQB1*03:05 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
| 41 | A*02:06-B*40:02-C*03:04-DRB1*04:03 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 42 | A*11:01-B*40:02-C*03:04-DRB1*04:03 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 43 | A*01:01-B*40:02-C*03:04-DRB1*04:03 | Hong Kong Chinese BMDR | 0.00 | 7,595 | 22_15_N_114_10_E |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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