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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*02:06-B*35:01-C*04:01-DRB1*04:03-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 2 | A*03:01:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01 | India Karnataka Kannada Speaking | 0.58 | 174 | 12_57_N_77_36_E |
| 3 | A*26:01:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01 | India Karnataka Kannada Speaking | 0.58 | 174 | 12_57_N_77_36_E |
| 4 | A*68:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Malaysia Peninsular Indian | 0.55 | 271 | 3_9_N_101_57_E |
| 5 | A*24:02:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01 | India Andhra Pradesh Telugu Speaking | 0.54 | 186 | 13_4_N_80_14_E |
| 6 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQA1*03:01-DQB1*03:02 | Kosovo | 0.40 | 124 | 42_34_N_21_0_E |
| 7 | A*32:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Malaysia Peninsular Indian | 0.37 | 271 | 3_9_N_101_57_E |
| 8 | A*02:01:01-B*35:01:01-C*04:01:01-DRB1*04:03:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 9 | A*11:01:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01 | India Kerala Malayalam speaking | 0.31 | 356 | 13_1_N_80_15_E |
| 10 | A*29:01:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01 | India Karnataka Kannada Speaking | 0.29 | 174 | 12_57_N_77_36_E |
| 11 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.25 | 5,849 | 28_36_N_77_11_E |
| 12 | A*33:03:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01 | India Kerala Malayalam speaking | 0.25 | 356 | 13_1_N_80_15_E |
| 13 | A*31:01:02-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:05:01 | Spain, Canary Islands, Gran canaria island | 0.23 | 215 | 27_57_N_15_36_W |
| 14 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India East UCBB | 0.23 | 2,403 | 22_25_N_88_18_E |
| 15 | A*03:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.22 | 2,492 | 11_32_N_78_52_E |
| 16 | A*02:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.22 | 1,376 | 38_45_N_76_6_W |
| 17 | A*32:01-B*35:01-C*04:01-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*02:01 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 18 | A*02:06-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.21 | 1,376 | 38_45_N_76_6_W |
| 19 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.21 | 4,204 | 27_1_N_81_19_E |
| 20 | A*02:01-B*35:01-C*04:01-DRB1*04:03 | Italy pop 5 | 0.20 | 975 | 45_28_N_9_11_E |
| 21 | A*32:01:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*04:01:01 | Brazil Rio de Janeiro Caucasian | 0.19 | 521 | 22_54_S_43_12_W |
| 22 | A*02:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02-DPB1*04:01 | Panama | 0.19 | 462 | 8_59_N_79_37_W |
| 23 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02-DPB1*04:02 | Panama | 0.19 | 462 | 8_59_N_79_37_W |
| 24 | A*02:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Malaysia Peninsular Indian | 0.18 | 271 | 3_9_N_101_57_E |
| 25 | A*03:01-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - Spain minority | 0.18 | 1,107 | 48_31_N_9_3_E |
| 26 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Northeast UCBB | 0.17 | 296 | 26_16_N_91_48_E |
| 27 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.16 | 5,829 | 19_11_N_73_3_E |
| 28 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*02:02 | Italy pop 5 | 0.14 | 975 | 45_28_N_9_11_E |
| 29 | A*03:01-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - Greece minority | 0.12 | 1,894 | 48_31_N_9_3_E |
| 30 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.11 | 11,446 | 13_6_N_80_8_E |
| 31 | A*26:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.10 | 2,492 | 11_32_N_78_52_E |
| 32 | A*68:01-B*35:01-C*04:01-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01 | United Arab Emirates Pop 1 | 0.09 | 570 | 24_42_N_54_82_E |
| 33 | A*32:01-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - Portugal minority | 0.09 | 1,176 | 48_31_N_9_3_E |
| 34 | A*03:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.08 | 4,204 | 27_1_N_81_19_E |
| 35 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.08 | 2,492 | 11_32_N_78_52_E |
| 36 | A*68:01-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - Greece minority | 0.08 | 1,894 | 48_31_N_9_3_E |
| 37 | A*33:03-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.07 | 2,492 | 11_32_N_78_52_E |
| 38 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.07 | 2,492 | 11_32_N_78_52_E |
| 39 | A*68:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.07 | 11,446 | 13_6_N_80_8_E |
| 40 | A*03:01-B*35:01-C*04:01-DRB1*04:03-DQA1*01:01-DQB1*03:02-DPB1*04:02 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
| 41 | A*01:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.07 | 11,446 | 13_6_N_80_8_E |
| 42 | A*03:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.07 | 11,446 | 13_6_N_80_8_E |
| 43 | A*11:01-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - Greece minority | 0.07 | 1,894 | 48_31_N_9_3_E |
| 44 | A*68:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India East UCBB | 0.05 | 2,403 | 22_25_N_88_18_E |
| 45 | A*03:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 46 | A*01:01-B*35:01-C*04:01-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*14:01 | United Arab Emirates Pop 1 | 0.05 | 570 | 24_42_N_54_82_E |
| 47 | A*02:17-B*35:01-C*04:01-DRB1*04:03-DQA1*02:01-DQB1*02:01-DPA1*01:03-DPB1*04:01 | United Arab Emirates Pop 1 | 0.05 | 570 | 24_42_N_54_82_E |
| 48 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 49 | A*26:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Germany DKMS - Turkey minority | 0.04 | 4,856 | 48_31_N_9_3_E |
| 50 | A*32:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.04 | 2,492 | 11_32_N_78_52_E |
| 51 | A*68:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.04 | 5,829 | 19_11_N_73_3_E |
| 52 | A*02:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Germany DKMS - Turkey minority | 0.04 | 4,856 | 48_31_N_9_3_E |
| 53 | A*24:02-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - Romania minority | 0.04 | 1,234 | 48_31_N_9_3_E |
| 54 | A*33:03-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.04 | 11,446 | 13_6_N_80_8_E |
| 55 | A*32:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.04 | 2,492 | 11_32_N_78_52_E |
| 56 | A*02:07-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - China minority | 0.04 | 1,282 | 48_31_N_9_3_E |
| 57 | A*32:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.04 | 11,446 | 13_6_N_80_8_E |
| 58 | A*32:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:04 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 59 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, | 0.03 | 4,335 | 41_22_N_2_11_E |
| 60 | A*02:11-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.03 | 5,829 | 19_11_N_73_3_E |
| 61 | A*02:01-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - Austria minority | 0.03 | 1,698 | 48_31_N_9_3_E |
| 62 | A*32:01-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - Austria minority | 0.03 | 1,698 | 48_31_N_9_3_E |
| 63 | A*11:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Germany DKMS - Turkey minority | 0.03 | 4,856 | 48_31_N_9_3_E |
| 64 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Germany DKMS - Turkey minority | 0.03 | 4,856 | 48_31_N_9_3_E |
| 65 | A*24:07-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.03 | 4,204 | 27_1_N_81_19_E |
| 66 | A*03:08-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.03 | 2,492 | 11_32_N_78_52_E |
| 67 | A*01:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
| 68 | A*68:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.02 | 4,204 | 27_1_N_81_19_E |
| 69 | A*02:01-B*35:01-C*04:01-DRB1*04:03 | Germany DKMS - Croatia minority | 0.02 | 2,057 | 48_31_N_9_3_E |
| 70 | A*01:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India East UCBB | 0.02 | 2,403 | 22_25_N_88_18_E |
| 71 | A*03:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.02 | 5,829 | 19_11_N_73_3_E |
| 72 | A*68:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
| 73 | A*02:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.02 | 11,446 | 13_6_N_80_8_E |
| 74 | A*33:03-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.02 | 5,829 | 19_11_N_73_3_E |
| 75 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:05 | India North UCBB | 0.02 | 5,849 | 28_36_N_77_11_E |
| 76 | A*02:11-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.02 | 11,446 | 13_6_N_80_8_E |
| 77 | A*31:01-B*35:01-C*04:01-DRB1*04:03 | Japan pop 16 | 0.02 | 18,604 | 35_41_N_139_46_E |
| 78 | A*32:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Germany DKMS - Turkey minority | 0.02 | 4,856 | 48_31_N_9_3_E |
| 79 | A*26:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.02 | 5,849 | 28_36_N_77_11_E |
| 80 | A*02:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.02 | 4,204 | 27_1_N_81_19_E |
| 81 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
| 82 | A*26:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
| 83 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
| 84 | A*02:01-B*35:01-C*04:01-DRB1*04:03 | Poland DKMS | 0.01 | 20,653 | 52_8_N_19_23_E |
| 85 | A*32:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
| 86 | A*01:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
| 87 | A*02:11-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
| 88 | A*68:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
| 89 | A*03:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 90 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*02:01 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
| 91 | A*31:01-B*35:01-C*04:01-DRB1*04:03-DQB1*02:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
| 92 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
| 93 | A*11:01-B*35:01-C*04:01-DRB1*04:03 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 94 | A*03:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:05 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 95 | A*24:02-B*35:01-C*04:01-DRB1*04:03-DQB1*03:05 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 96 | A*11:02:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 97 | A*31:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
| 98 | A*03:01-B*35:01-C*04:01-DRB1*04:03 | Poland DKMS | 0.01 | 20,653 | 52_8_N_19_23_E |
| 99 | A*31:01:02-B*35:01:01-C*04:01:01-DRB1*04:03:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 100 | A*24:17-B*35:01-C*04:01-DRB1*04:03-DQB1*06:03 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
| 101 | A*31:01-B*35:01-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
| 102 | A*01:01:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01 | Poland BMR | 0.01 | 23,595 | 52_0_N_19_22_E |
| 103 | A*24:02-B*35:01-C*04:01-DRB1*04:03 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 104 | A*24:02:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
| 105 | A*11:01-B*35:01-C*04:01-DRB1*04:03 | Poland DKMS | 0.00 | 20,653 | 52_8_N_19_23_E |
| 106 | A*02:01:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
| 107 | A*24:02:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:03:02 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
| 108 | A*26:01:01-B*35:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:05:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
| 109 | A*32:01-B*35:01-C*04:01-DRB1*04:03 | Poland DKMS | 0.00 | 20,653 | 52_8_N_19_23_E |
| 110 | A*26:01-B*35:01-C*04:01-DRB1*04:03 | Poland DKMS | 0.00 | 20,653 | 52_8_N_19_23_E |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
support@allelefrequencies.net