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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*68:05-B*39:05:01-C*07:02:01-DRB1*04:07 | Costa Rica Amerindians (G) | 0.81 | 125 | 9_34_N_83_25_W |
| 2 | A*02:01:01-B*39:05:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 3 | A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:11:01 | Costa Rica Guanacaste Mestizo (G) | 0.45 | 110 | 10_16_N_85_37_W |
| 4 | A*02:11:01-B*39:05:01-C*07:02:01-DRB1*04:07 | Costa Rica Guanacaste Mestizo (G) | 0.45 | 110 | 10_16_N_85_37_W |
| 5 | A*24:02:01-B*39:05:01-C*07:02:01-DRB1*08:02:01 | Costa Rica Guanacaste Mestizo (G) | 0.45 | 110 | 10_16_N_85_37_W |
| 6 | A*68:03:01-B*39:05:01-C*07:02:01-DRB1*04:07 | Costa Rica Guanacaste Mestizo (G) | 0.45 | 110 | 10_16_N_85_37_W |
| 7 | A*03:01:01-B*39:05:01-C*07:02:01-DRB1*08:02:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 8 | A*31:01:02-B*39:05:01-C*07:02:01-DRB1*04:07 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 9 | A*68:01:02-B*39:05:01-C*07:02:01-DRB1*04:04:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 10 | A*68:01:02-B*39:05:01-C*07:02:01-DRB1*08:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 11 | A*31:01:02-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*05:01 | Costa Rica Central Valley Mestizo (G) | 0.23 | 221 | 9_55_N_84_5_W |
| 12 | A*68:01:02-B*39:05:01-C*07:02:01-DRB1*14:02-DQB1*03:01 | Costa Rica Central Valley Mestizo (G) | 0.23 | 221 | 9_55_N_84_5_W |
| 13 | A*11:01:01-B*39:05:01-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01 | China Zhejiang Han | 0.09 | 1,734 | 27_2_N_118_1_E |
| 14 | A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*02:01 | Costa Rica Central Valley Mestizo (G) | 0.07 | 221 | 9_55_N_84_5_W |
| 15 | A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*06:03 | Costa Rica Central Valley Mestizo (G) | 0.07 | 221 | 9_55_N_84_5_W |
| 16 | A*11:01:01-B*39:05:01-C*07:02:01-DRB1*14:54:01-DPB1*13:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.07 | 5,266 | 22_25_N_114_17_E |
| 17 | A*24:02:01-B*39:05:01-C*07:02:01-DRB1*14:54:01-DPB1*13:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.05 | 5,266 | 22_25_N_114_17_E |
| 18 | A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*05:01 | Costa Rica Central Valley Mestizo (G) | 0.05 | 221 | 9_55_N_84_5_W |
| 19 | A*24:02:01-B*39:05:01-C*07:02:01-DRB1*04:06:01-DQB1*03:02:01 | China Zhejiang Han | 0.04 | 1,734 | 27_2_N_118_1_E |
| 20 | A*02:01:01:01-B*39:05:01-C*12:03:01:01-DRB1*04:03:01-DQB1*03:04:01 | Russia Nizhny Novgorod, Russians | 0.03 | 1,510 | 56_19_N_43_59_E |
| 21 | A*02:06:01-B*39:05:01-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 22 | A*11:01:01-B*39:05:01-C*07:02:01-DRB1*14:54:01-DQB1*05:03:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 23 | A*24:02:01-B*39:05:01-C*07:02:01-DRB1*14:54:01-DQB1*05:03:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 24 | A*24:02:01-B*39:05:01-C*07:02:01-DRB1*14:54:01-DPB1*02:02:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.02 | 5,266 | 22_25_N_114_17_E |
| 25 | A*24:02:01-B*39:05:01-C*07:02:01-DRB1*14:54:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.02 | 5,266 | 22_25_N_114_17_E |
| 26 | A*11:02:01-B*39:05:01-C*07:02:01-DRB1*09:01:02-DQB1*03:03:02 | China Zhejiang Han | 0.02 | 1,734 | 27_2_N_118_1_E |
| 27 | A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 0.02 | 221 | 9_55_N_84_5_W |
| 28 | A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*03:01 | Costa Rica Central Valley Mestizo (G) | 0.02 | 221 | 9_55_N_84_5_W |
| 29 | A*02:03:01-B*39:05:01-C*07:02:01-DRB1*14:54:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.02 | 5,266 | 22_25_N_114_17_E |
| 30 | A*11:01:01-B*39:05:01-C*07:02:01-DRB1*14:54:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 31 | A*02:07:01-B*39:05:01-C*07:02:01-DRB1*14:54:01-DPB1*13:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 32 | A*03:01:01-B*39:05:01-C*12:03:01-DRB1*16:01:01-DQB1*05:02:01 | Poland BMR | 0.01 | 23,595 | 52_0_N_19_22_E |
| 33 | A*11:01:01-B*39:05:01-C*07:02:01-DRB1*11:01:01-DPB1*14:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 34 | A*02:01:01-B*39:05:01-C*12:03:01-DRB1*16:01:01-DQB1*05:02:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
| 35 | A*31:01:02-B*39:05:01-C*12:03:01-DRB1*01:01:01-DQB1*04:02:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
| 36 | A*31:01:02-B*39:05:01-C*12:03:01-DRB1*16:01:01-DQB1*05:02:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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