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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | B*39:08-C*07:02 | Mexico Oaxaca Zapotec | 2.20 | 90 | 17_5_N_96_45_W |
| 2 | A*68:03-B*39:08-DRB1*08:02 | Mexico Mixtec | 2.10 | 97 | 23_57_N_103_29_W |
| 3 | A*68:03-B*39:08-DRB1*08:02 | Mexico Oaxaca Jamiltepec Mixtec | 2.08 | 96 | 16_25_N_97_58_W |
| 4 | A*02:01:01-B*39:08-C*07:02:01-DRB1*04:07 | Costa Rica Amerindians (G) | 2.00 | 125 | 9_34_N_83_25_W |
| 5 | B*39:08-C*07:02 | Mexico Oaxaca Mixtec | 1.00 | 103 | 17_5_N_96_45_W |
| 6 | A*68:07-B*39:08-C*07:02:01-DRB1*14:02-DQB1*03:01 | Costa Rica Central Valley Mestizo (G) | 0.90 | 221 | 9_55_N_84_5_W |
| 7 | B*39:08-C*07:02 | Mexico Mexico City Mestizo pop 2 | 0.64 | 234 | 19_26_N_99_8_W |
| 8 | A*68:01-B*39:08-DRB1*08:02 | Mexico Oaxaca Jamiltepec Mixtec | 0.52 | 96 | 16_25_N_97_58_W |
| 9 | A*02:06-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.46 | 218 | 16_54_N_92_5_W |
| 10 | A*68:01:02-B*39:08-C*07:02:01-DRB1*08:02:01-DQB1*04:02:01 | Costa Rica Central Valley Mestizo (G) | 0.45 | 221 | 9_55_N_84_5_W |
| 11 | A*68:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.43 | 339 | 12_7_N_86_10_W |
| 12 | B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 | Mexico Mexico City Mestizo pop 2 | 0.43 | 234 | 19_26_N_99_8_W |
| 13 | A*24:02:01-B*39:08-C*03:04:01-DRB1*08:02:01 | Costa Rica Amerindians (G) | 0.41 | 125 | 9_34_N_83_25_W |
| 14 | A*68:03-B*39:08-C*07:17-DRB1*08:02-DQB1*04:02 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 15 | B*39:08-C*07:17 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 16 | B*39:08-C*07:17-DRB1*08:02-DQB1*04:02 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 17 | A*02:01:01-B*39:08-C*07:02:01-DRB1*01:02:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 18 | A*02:01:01-B*39:08-C*07:02:01-DRB1*14:06:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 19 | A*02:05:01-B*39:08-C*07:02:01-DRB1*08:02:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 20 | A*30:02:01-B*39:08-C*07:01:01-DRB1*08:02:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 21 | A*30:02:01-B*39:08-C*07:02:01-DRB1*14:06:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 22 | A*31:01:02-B*39:08-C*07:02:01-DRB1*04:07 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 23 | A*68:07-B*39:08-C*07:02:01-DRB1*09:01:02 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 24 | A*02:06-B*39:08-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 25 | A*24:02-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 26 | A*24:02-B*39:08-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 27 | A*31:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:03-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 28 | A*02:01:01-B*39:08-C*07:02:01-DRB1*04:10:01-DQB1*04:02:01 | Costa Rica Central Valley Mestizo (G) | 0.23 | 221 | 9_55_N_84_5_W |
| 29 | A*02:01:01-B*39:08-C*07:02:01-DRB1*13:02:01-DQB1*06:04 | Costa Rica Central Valley Mestizo (G) | 0.23 | 221 | 9_55_N_84_5_W |
| 30 | A*24:02:01-B*39:08-C*07:02:01-DRB1*04:10:01-DQB1*04:02:01 | Costa Rica Central Valley Mestizo (G) | 0.23 | 221 | 9_55_N_84_5_W |
| 31 | A*30:02:01-B*39:08-C*04:01:01-DRB1*01:02:01-DQB1*05:01 | Costa Rica Central Valley Mestizo (G) | 0.23 | 221 | 9_55_N_84_5_W |
| 32 | A*03:01-B*39:08-C*07:02-DRB1*04:05-DQA1*03:01-DQB1*04:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 33 | A*68:01-B*39:08-C*07:02-DRB1*04:01-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 34 | A*68:03-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 35 | A*68:03-B*39:08-C*07:17-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPB1*03:01 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 36 | A*68:07-B*39:08-C*07:02-DRB1*01:02-DQA1*05:01-DQB1*05:01-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 37 | A*02:06-B*39:08-C*15:02-DRB1*16:11-DQB1*03:01-DPB1*04:02 | Panama | 0.19 | 462 | 8_59_N_79_37_W |
| 38 | A*23:01-B*39:08-C*02:10-DRB1*04:01-DQB1*04:02-DPB1*04:01 | Panama | 0.19 | 462 | 8_59_N_79_37_W |
| 39 | A*24:02-B*39:08-C*07:02-DRB1*04:05-DQB1*04:02-DPB1*14:01 | Panama | 0.19 | 462 | 8_59_N_79_37_W |
| 40 | A*31:01-B*39:08-C*04:01-DRB1*04:10-DQB1*04:02-DPB1*14:01 | Panama | 0.19 | 462 | 8_59_N_79_37_W |
| 41 | B*39:08-C*07:02 | USA Hispanic pop 2 | 0.18 | 1,999 | 44_58_N_93_15_W |
| 42 | A*02:01:01-B*39:08-C*07:02:01-DRB1*08:02:01 | Costa Rica Amerindians (G) | 0.11 | 125 | 9_34_N_83_25_W |
| 43 | A*02:01-B*39:08 | USA Hispanic pop 2 | 0.10 | 1,999 | 44_58_N_93_15_W |
| 44 | A*68:05-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.09 | 1,999 | 44_58_N_93_15_W |
| 45 | A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*05:01 | Costa Rica Central Valley Mestizo (G) | 0.09 | 221 | 9_55_N_84_5_W |
| 46 | A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*06:02 | Costa Rica Central Valley Mestizo (G) | 0.09 | 221 | 9_55_N_84_5_W |
| 47 | A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*06:03 | Costa Rica Central Valley Mestizo (G) | 0.08 | 221 | 9_55_N_84_5_W |
| 48 | A*68:05-B*39:08 | USA Hispanic pop 2 | 0.08 | 1,999 | 44_58_N_93_15_W |
| 49 | A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 0.07 | 221 | 9_55_N_84_5_W |
| 50 | A*24:14-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01 | Colombia Bogotá Cord Blood | 0.07 | 1,463 | 4_39_N_73_52_W |
| 51 | A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*06:02 | Costa Rica Central Valley Mestizo (G) | 0.06 | 221 | 9_55_N_84_5_W |
| 52 | A*24:02-B*39:08-C*07:02-DRB1*04:10-DQB1*04:02 | Colombia Bogotá Cord Blood | 0.06 | 1,463 | 4_39_N_73_52_W |
| 53 | A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*03:01 | Costa Rica Central Valley Mestizo (G) | 0.05 | 221 | 9_55_N_84_5_W |
| 54 | B*39:08-C*07:17 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 55 | A*02:01-B*39:08-C*07:02-DRB1*04:04-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 56 | A*02:01-B*39:08-C*07:17-DRB1*04:10-DQB1*04:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 57 | A*68:03-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 58 | A*68:07-B*39:08-C*07:02-DRB1*04:03-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 59 | A*24:14-B*39:08-C*07:02-DRB1*04:10-DQB1*04:02 | Colombia Bogotá Cord Blood | 0.05 | 1,463 | 4_39_N_73_52_W |
| 60 | A*02:01-B*39:08-C*07:02-DRB1*16:02-DQB1*03:01 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 61 | A*02:22-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 62 | A*02:22-B*39:08-C*07:02-DRB1*11:01-DQB1*03:01 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 63 | A*24:14-B*39:08-C*07:02-DRB1*08:02-DQB1*04:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 64 | A*32:01-B*39:08-C*07:02-DRB1*04:05-DQB1*04:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 65 | A*33:03-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 66 | A*68:01-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 67 | A*68:03-B*39:08 | USA Hispanic pop 2 | 0.03 | 1,999 | 44_58_N_93_15_W |
| 68 | A*68:07-B*39:08 | USA Hispanic pop 2 | 0.03 | 1,999 | 44_58_N_93_15_W |
| 69 | A*02:01-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.02 | 1,999 | 44_58_N_93_15_W |
| 70 | A*02:01-B*39:08-C*07:02-DRB1*04:11-DQB1*04:02 | USA Hispanic pop 2 | 0.02 | 1,999 | 44_58_N_93_15_W |
| 71 | A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*05:01 | Costa Rica Central Valley Mestizo (G) | 0.01 | 221 | 9_55_N_84_5_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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