Allele Frequencies in World Populations

HLA » Haplotype Frequency Search

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Line Haplotype Population Frequency (%) Sample Size Location
1A*02:22:01-B*39:11-C*07:02:01-DRB1*04:10:01Costa Rica Guanacaste Mestizo (G)0.4511010_16_N_85_37_W
2A*02:01:01-B*39:11-C*07:02:01-DRB1*04:11:01-DQB1*03:02Costa Rica Central Valley Mestizo (G)0.322219_55_N_84_5_W
3A*02:22:01-B*39:11-C*07:02:01-DRB1*04:05:04Nicaragua Mestizo (G)0.3215512_40_N_85_13_W
4A*31:01:02-B*39:11-C*12:02:02-DRB1*14:02Nicaragua Mestizo (G)0.3215512_40_N_85_13_W
5A*01:01-B*39:11-C*07:02-DRB1*14:02-DQA1*05:01-DQB1*05:01-DPB1*04:01Nicaragua Managua0.2233912_7_N_86_10_W
6A*02:01-B*39:11-C*04:01-DRB1*14:02-DQA1*05:01-DQB1*03:01-DPB1*04:01Nicaragua Managua0.2233912_7_N_86_10_W
7A*23:01-B*39:11-C*07:01-DRB1*13:02-DQA1*01:02-DQB1*04:02-DPB1*04:02Nicaragua Managua0.2233912_7_N_86_10_W
8A*24:02-B*39:11-C*08:03-DRB1*16:02-DQA1*03:01-DQB1*04:02-DPB1*04:01Nicaragua Managua0.2233912_7_N_86_10_W
9A*31:01-B*39:11-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*14:01Nicaragua Managua0.2233912_7_N_86_10_W
10A*02:01-B*39:11-C*07:01-DRB1*14:02-DQB1*03:02-DPB1*04:02Panama0.194628_59_N_79_37_W
11A*24:02-B*39:11-C*03:05-DRB1*04:07-DQB1*04:02-DPB1*14:01Panama0.194628_59_N_79_37_W
12A*31:01-B*39:11-C*01:02-DRB1*14:02-DQB1*03:01-DPB1*04:02Panama0.194628_59_N_79_37_W
13A*31:12-B*39:11-C*07:06-DRB1*01:02-DQB1*05:01-DPB1*04:02Panama0.194628_59_N_79_37_W
14A*33:01-B*39:11-C*16:01-DRB1*14:02-DQB1*06:09-DPB1*02:01Panama0.194628_59_N_79_37_W
15A*02:01-B*39:11-C*07:02-DRB1*04:10-DQB1*04:02Colombia Bogotá Cord Blood0.141,4634_39_N_73_52_W
16A*02:01-B*39:11-C*07:02-DRB1*16:02-DQB1*03:01Colombia Bogotá Cord Blood0.141,4634_39_N_73_52_W
17B*39:11-C*07:02USA Hispanic pop 20.131,99944_58_N_93_15_W
18A*68:01-B*39:11-C*07:02-DRB1*16:02-DQB1*03:01Colombia Bogotá Cord Blood0.101,4634_39_N_73_52_W
19A*02:01-B*39:11-C*07:02-DRB1*14:02-DQB1*03:01Colombia Bogotá Cord Blood0.101,4634_39_N_73_52_W
20A*02:01:01-B*39:11-C*07:02:01-DRB1*04:11:01-DQB1*04:02:01Costa Rica Central Valley Mestizo (G)0.062219_55_N_84_5_W
21A*02:01:01-B*39:11-C*07:02:01-DRB1*04:11:01-DQB1*06:02Costa Rica Central Valley Mestizo (G)0.062219_55_N_84_5_W
22A*02:16-B*39:11-DRB1*13:01Israel Bukhara Jews0.062,31732_8_N_34_52_E
23A*02:17-B*39:11-DRB1*13:01Israel Bukhara Jews0.062,31732_8_N_34_52_E
24A*02:36-B*39:11-DRB1*13:01Israel Bukhara Jews0.062,31732_8_N_34_52_E
25A*31:01-B*39:11USA Hispanic pop 20.051,99944_58_N_93_15_W
26A*31:01-B*39:11-C*07:02-DRB1*16:02-DQB1*03:01USA Hispanic pop 20.051,99944_58_N_93_15_W
27A*02:01-B*39:11-C*07:02-DRB1*08:02-DQB1*04:02Colombia Bogotá Cord Blood0.041,4634_39_N_73_52_W
28A*02:22-B*39:11-C*07:02-DRB1*14:02-DQB1*03:01Colombia Bogotá Cord Blood0.041,4634_39_N_73_52_W
29A*02:01-B*39:11-C*07:02-DRB1*04:03-DQB1*04:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
30A*02:01-B*39:11-C*07:02-DRB1*04:05-DQB1*04:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
31A*02:01-B*39:11-C*07:02-DRB1*07:01-DQB1*02:01Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
32A*02:22-B*39:11-C*07:02-DRB1*04:10-DQB1*04:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
33A*02:22-B*39:11-C*07:02-DRB1*13:03-DQB1*03:01Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
34A*24:02-B*39:11-C*07:02-DRB1*04:04-DQB1*03:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
35A*26:01-B*39:11-C*07:02-DRB1*15:01-DQB1*04:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
36A*32:01-B*39:11-C*07:02-DRB1*04:07-DQB1*03:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
37A*02:01-B*39:11-C*07:02-DRB1*04:10-DQB1*04:02Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria,0.034,33541_22_N_2_11_E
38A*01:01-B*39:11USA Hispanic pop 20.031,99944_58_N_93_15_W
39A*02:02-B*39:11USA Hispanic pop 20.031,99944_58_N_93_15_W
40A*34:02-B*39:11USA Hispanic pop 20.031,99944_58_N_93_15_W
41A*02:01-B*39:11-C*07:02-DRB1*16:01-DQB1*05:02USA Hispanic pop 20.021,99944_58_N_93_15_W
42A*34:02-B*39:11-C*07:02-DRB1*16:01-DQB1*05:02USA Hispanic pop 20.021,99944_58_N_93_15_W
43A*02:02-B*39:11-DRB1*13:01Israel Bukhara Jews0.022,31732_8_N_34_52_E
44A*03:02-B*39:11-DRB1*11:01Israel Bukhara Jews0.022,31732_8_N_34_52_E
45A*24:04-B*39:11-DRB1*12:01Israel Bukhara Jews0.022,31732_8_N_34_52_E
46A*02:02-B*39:11-DRB1*13:02Israel Bukhara Jews0.012,31732_8_N_34_52_E
47A*02:02-B*39:11-DRB1*13:03Israel Bukhara Jews0.012,31732_8_N_34_52_E
48A*02:02-B*39:11-DRB1*13:05Israel Bukhara Jews0.012,31732_8_N_34_52_E
49A*02:01-B*39:11-C*07:02-DRB1*04:04-DQB1*03:02USA Hispanic pop 20.011,99944_58_N_93_15_W
50A*02:01-B*39:11-C*07:02-DRB1*15:03-DQB1*06:02USA Hispanic pop 20.011,99944_58_N_93_15_W
51A*31:01-B*39:11-C*07:02-DRB1*04:04-DQB1*03:02USA Hispanic pop 20.011,99944_58_N_93_15_W
52A*31:01-B*39:11-C*07:02-DRB1*15:03-DQB1*06:02USA Hispanic pop 20.011,99944_58_N_93_15_W



   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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