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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | B*78:01-C*16:01 | Mali Bandiagara | 7.00 | 138 | 14_4_N_3_6_W |
| 2 | A*33:03-B*78:01-C*16:01 | Mali Bandiagara | 2.70 | 138 | 14_4_N_3_6_W |
| 3 | B*78:01-C*16:01 | USA African American pop 4 | 1.23 | 2,411 | 44_58_N_93_15_W |
| 4 | A*30:02-B*78:01-C*16:01 | Mali Bandiagara | 1.20 | 138 | 14_4_N_3_6_W |
| 5 | A*30:02-B*78:01-DRB1*03:02 | Tunisia pop 3 | 1.20 | 104 | 36_48_N_10_11_E |
| 6 | A*68:02-B*78:01-C*16:01 | Mali Bandiagara | 1.20 | 138 | 14_4_N_3_6_W |
| 7 | A*02:02-B*78:01 | Mali Bandiagara | 1.10 | 138 | 14_4_N_3_6_W |
| 8 | A*33:01-B*78:01 | Mali Bandiagara | 1.10 | 138 | 14_4_N_3_6_W |
| 9 | A*68:02-B*78:01 | Mali Bandiagara | 1.10 | 138 | 14_4_N_3_6_W |
| 10 | A*29:01:01-B*78:01:01-C*16:01:01-DRB1*07:01:01-DQB1*03:03:03 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 11 | A*33:01-B*78:01-DRB1*13:01-DQB1*06:03 | Mexico Veracruz Xalapa | 0.60 | 84 | 19_32_N_96_55_W |
| 12 | A*03:01-B*78:01-DRB1*07:01-DQB1*02:01 | Iran Tabriz Azeris | 0.52 | 97 | 38_4_N_46_17_E |
| 13 | A*33:01-B*78:01 | USA African American pop 4 | 0.49 | 2,411 | 44_58_N_93_15_W |
| 14 | A*26:01:01-B*78:01:01-C*03:04:02-DRB1*03:01 | Costa Rica African -Caribbean (G) | 0.49 | 102 | 9_59_N_83_1_W |
| 15 | A*26:01:01-B*78:01:01-C*16:02:01-DRB1*04:05:01-DQB1*05:01:01 | India Karnataka Kannada Speaking | 0.29 | 174 | 12_57_N_77_36_E |
| 16 | A*30:02-B*78:01-C*16:01-DRB1*07:01-DQB1*02:01 | USA African American pop 4 | 0.26 | 2,411 | 44_58_N_93_15_W |
| 17 | A*33:01-B*78:01-C*16:01-DRB1*13:01-DQB1*06:03 | USA NMDP Caribean Indian | 0.18 | 14,339 | 38_45_N_76_6_W |
| 18 | A*30:02-B*78:01 | USA African American pop 4 | 0.15 | 2,411 | 44_58_N_93_15_W |
| 19 | A*68:01-B*78:01-C*16:01-DRB1*03:01-DQB1*05:01 | Italy pop 5 | 0.14 | 975 | 45_28_N_9_11_E |
| 20 | A*03:01-B*78:01-C*16:01-DRB1*03:01-DQB1*02:01 | USA African American pop 4 | 0.13 | 2,411 | 44_58_N_93_15_W |
| 21 | A*33:01-B*78:01-C*16:01-DRB1*13:01-DQB1*06:03 | USA African American pop 4 | 0.13 | 2,411 | 44_58_N_93_15_W |
| 22 | A*30:01-B*78:01 | USA African American pop 4 | 0.13 | 2,411 | 44_58_N_93_15_W |
| 23 | B*78:01-C*16:01 | USA Hispanic pop 2 | 0.13 | 1,999 | 44_58_N_93_15_W |
| 24 | A*68:01-B*78:01-C*07:02-DRB1*03:01 | Italy pop 5 | 0.10 | 975 | 45_28_N_9_11_E |
| 25 | A*03:01-B*78:01 | USA African American pop 4 | 0.10 | 2,411 | 44_58_N_93_15_W |
| 26 | A*68:01-B*78:01-C*16:01 | Italy pop 5 | 0.09 | 975 | 45_28_N_9_11_E |
| 27 | A*68:02-B*78:01-C*16:01-DRB1*13:01 | Germany DKMS - Spain minority | 0.09 | 1,107 | 48_31_N_9_3_E |
| 28 | A*33:01-B*78:01-C*16:01-DRB1*07:01-DQB1*02:01 | USA African American pop 4 | 0.09 | 2,411 | 44_58_N_93_15_W |
| 29 | A*68:02-B*78:01 | USA African American pop 4 | 0.08 | 2,411 | 44_58_N_93_15_W |
| 30 | A*29:02-B*78:01 | USA African American pop 4 | 0.08 | 2,411 | 44_58_N_93_15_W |
| 31 | A*74:01-B*78:01 | USA African American pop 4 | 0.06 | 2,411 | 44_58_N_93_15_W |
| 32 | B*78:01-C*02:02 | USA African American pop 4 | 0.06 | 2,411 | 44_58_N_93_15_W |
| 33 | A*66:01-B*78:01 | USA African American pop 4 | 0.05 | 2,411 | 44_58_N_93_15_W |
| 34 | A*03:01-B*78:01-C*16:01-DRB1*01:02-DQB1*05:01 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 35 | A*68:01-B*78:01-C*16:01-DRB1*04:11-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 36 | A*02:01-B*78:01-C*16:01-DRB1*13:01 | Germany DKMS - Spain minority | 0.05 | 1,107 | 48_31_N_9_3_E |
| 37 | A*03:01-B*78:01-C*16:01-DRB1*10:01 | Germany DKMS - Spain minority | 0.05 | 1,107 | 48_31_N_9_3_E |
| 38 | A*30:02-B*78:01-C*16:01-DRB1*11:01 | Germany DKMS - Spain minority | 0.05 | 1,107 | 48_31_N_9_3_E |
| 39 | A*01:01-B*78:01-C*16:01-DRB1*09:01-DQB1*02:01 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 40 | A*01:01-B*78:01-C*16:01-DRB1*13:04-DQB1*03:01 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 41 | A*02:01-B*78:01-C*16:01-DRB1*13:02-DQB1*06:09 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 42 | A*23:01-B*78:01-C*16:01-DRB1*11:01-DQB1*03:01 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 43 | A*26:01-B*78:01-C*16:01-DRB1*11:01-DQB1*03:01 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 44 | A*29:02-B*78:01-C*16:01-DRB1*03:01-DQB1*02:01 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 45 | A*29:02-B*78:01-C*16:01-DRB1*13:02-DQB1*06:09 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 46 | A*30:01-B*78:01-C*16:01-DRB1*13:02-DQB1*06:09 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 47 | A*31:01-B*78:01-C*16:01-DRB1*13:01-DQB1*03:01 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 48 | A*68:02-B*78:01-C*16:01-DRB1*13:01-DQB1*06:03 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 49 | A*01:01-B*78:01 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 50 | A*68:02-B*78:01-C*16:01-DRB1*13:02 | Germany DKMS - Portugal minority | 0.04 | 1,176 | 48_31_N_9_3_E |
| 51 | A*31:01-B*78:01-C*12:03-DRB1*13:01-DQB1*06:03 | India Tamil Nadu | 0.04 | 2,492 | 11_32_N_78_52_E |
| 52 | A*23:01-B*78:01 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 53 | A*33:01-B*78:01 | USA Hispanic pop 2 | 0.04 | 1,999 | 44_58_N_93_15_W |
| 54 | A*30:02-B*78:01-C*16:01-DRB1*10:01 | Germany DKMS - France minority | 0.04 | 1,406 | 48_31_N_9_3_E |
| 55 | A*33:03-B*78:01-C*16:01-DRB1*09:01-DQB1*05:01 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 56 | A*33:01-B*78:01-C*16:01-DRB1*10:01-DQB1*05:01 | Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, | 0.03 | 4,335 | 41_22_N_2_11_E |
| 57 | A*68:01-B*78:01 | USA African American pop 4 | 0.03 | 2,411 | 44_58_N_93_15_W |
| 58 | A*01:01-B*78:01 | USA Hispanic pop 2 | 0.03 | 1,999 | 44_58_N_93_15_W |
| 59 | A*31:01-B*78:01 | USA African American pop 4 | 0.03 | 2,411 | 44_58_N_93_15_W |
| 60 | A*02:02-B*78:01 | USA Hispanic pop 2 | 0.03 | 1,999 | 44_58_N_93_15_W |
| 61 | A*03:01-B*78:01-C*16:01-DRB1*14:01-DQB1*05:03 | USA African American pop 4 | 0.02 | 2,411 | 44_58_N_93_15_W |
| 62 | A*26:01-B*78:01 | USA African American pop 4 | 0.02 | 2,411 | 44_58_N_93_15_W |
| 63 | A*33:01-B*78:01-C*16:01-DRB1*14:01-DQB1*05:03 | USA African American pop 4 | 0.02 | 2,411 | 44_58_N_93_15_W |
| 64 | A*02:05-B*78:01 | USA African American pop 4 | 0.02 | 2,411 | 44_58_N_93_15_W |
| 65 | B*78:01-C*01:02 | USA African American pop 4 | 0.02 | 2,411 | 44_58_N_93_15_W |
| 66 | A*11:01-B*78:01-C*12:03-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
| 67 | A*11:01-B*78:01-C*12:03-DRB1*10:01-DQB1*05:01 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
| 68 | A*33:03-B*78:01 | USA Hispanic pop 2 | 0.02 | 1,999 | 44_58_N_93_15_W |
| 69 | A*03:01-B*78:01 | USA Hispanic pop 2 | 0.01 | 1,999 | 44_58_N_93_15_W |
| 70 | A*24:02-B*78:01-C*16:01-DRB1*03:01-DQB1*02:01 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 71 | A*24:02-B*78:01-C*16:01-DRB1*04:05-DQB1*02:01 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 72 | A*30:01-B*78:01-C*17:01-DRB1*03:02-DQB1*04:02 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 73 | A*30:01-B*78:01-C*17:01-DRB1*13:02-DQB1*06:09 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 74 | A*33:01-B*78:01-C*16:01-DRB1*03:01-DQB1*02:01 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 75 | A*33:01-B*78:01-C*16:01-DRB1*04:05-DQB1*02:01 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 76 | A*68:01-B*78:01-C*17:01-DRB1*03:02-DQB1*04:02 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 77 | A*68:01-B*78:01-C*17:01-DRB1*13:02-DQB1*06:09 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 78 | A*02:01-B*78:01-C*12:03-DRB1*13:01-DQB1*06:03 | India Tamil Nadu | 0.01 | 2,492 | 11_32_N_78_52_E |
| 79 | A*02:01-B*78:01-C*12:03-DRB1*13:02-DQB1*06:09 | India Tamil Nadu | 0.01 | 2,492 | 11_32_N_78_52_E |
| 80 | A*03:02-B*78:01-DRB1*09:01 | Israel USA Jews | 0.01 | 6,058 | 32_10_N_34_52_E |
| 81 | A*31:01-B*78:01-DRB1*13:01 | Israel USA Jews | 0.01 | 6,058 | 32_10_N_34_52_E |
| 82 | A*68:02-B*78:01-DRB1*08:06 | Israel Arab pop 2 | 0.01 | 12,301 | 32_8_N_34_52_E |
| 83 | A*33:03-B*78:01 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 84 | A*33:01-B*78:01-DRB1*13:03 | Israel Arab pop 2 | 0.00 | 12,301 | 32_8_N_34_52_E |
| 85 | A*68:02-B*78:01-DRB1*08:04 | Israel Arab pop 2 | 0.00 | 12,301 | 32_8_N_34_52_E |
| 86 | A*68:02-B*78:01-DRB1*04:03 | Israel Arab pop 2 | 0.00 | 12,301 | 32_8_N_34_52_E |
| 87 | A*66:01-B*78:01-DRB1*03:01 | Israel Arab pop 2 | 0.00 | 12,301 | 32_8_N_34_52_E |
| 88 | A*66:01-B*78:01-DRB1*03:02 | Israel Arab pop 2 | 0.00 | 12,301 | 32_8_N_34_52_E |
| 89 | A*24:02-B*78:01-C*12:03-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 90 | A*24:03-B*78:01-C*12:03-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 91 | A*24:07-B*78:01-C*12:03-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 92 | A*24:10-B*78:01-C*12:03-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 93 | A*24:17-B*78:01-C*12:03-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 94 | A*24:32-B*78:01-C*12:03-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 95 | A*24:55-B*78:01-C*12:03-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 96 | A*24:02-B*78:01-C*12:03-DRB1*15:02-DQB1*05:03 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 97 | A*24:03-B*78:01-C*12:03-DRB1*15:02-DQB1*05:03 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 98 | A*24:07-B*78:01-C*12:03-DRB1*15:02-DQB1*05:03 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 99 | A*24:10-B*78:01-C*12:03-DRB1*15:02-DQB1*05:03 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 100 | A*24:17-B*78:01-C*12:03-DRB1*15:02-DQB1*05:03 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 101 | A*24:32-B*78:01-C*12:03-DRB1*15:02-DQB1*05:03 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 102 | A*24:55-B*78:01-C*12:03-DRB1*15:02-DQB1*05:03 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 103 | A*24:02-B*78:01-C*12:03-DRB1*15:01-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 104 | A*24:02-B*78:01-C*12:03-DRB1*15:06-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 105 | A*24:03-B*78:01-C*12:03-DRB1*15:01-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 106 | A*24:03-B*78:01-C*12:03-DRB1*15:06-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 107 | A*24:07-B*78:01-C*12:03-DRB1*15:01-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 108 | A*24:07-B*78:01-C*12:03-DRB1*15:06-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 109 | A*24:10-B*78:01-C*12:03-DRB1*15:01-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 110 | A*24:10-B*78:01-C*12:03-DRB1*15:06-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 111 | A*24:17-B*78:01-C*12:03-DRB1*15:01-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 112 | A*24:17-B*78:01-C*12:03-DRB1*15:06-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 113 | A*24:32-B*78:01-C*12:03-DRB1*15:01-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 114 | A*24:32-B*78:01-C*12:03-DRB1*15:06-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 115 | A*24:55-B*78:01-C*12:03-DRB1*15:01-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 116 | A*24:55-B*78:01-C*12:03-DRB1*15:06-DQB1*05:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 117 | A*24:02-B*78:01-C*12:03-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 118 | A*24:02-B*78:01-C*12:03-DRB1*04:04-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 119 | A*24:03-B*78:01-C*12:03-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 120 | A*24:03-B*78:01-C*12:03-DRB1*04:04-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 121 | A*24:07-B*78:01-C*12:03-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 122 | A*24:07-B*78:01-C*12:03-DRB1*04:04-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 123 | A*24:10-B*78:01-C*12:03-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 124 | A*24:10-B*78:01-C*12:03-DRB1*04:04-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 125 | A*24:17-B*78:01-C*12:03-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 126 | A*24:17-B*78:01-C*12:03-DRB1*04:04-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 127 | A*24:32-B*78:01-C*12:03-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 128 | A*24:32-B*78:01-C*12:03-DRB1*04:04-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 129 | A*24:55-B*78:01-C*12:03-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
| 130 | A*24:55-B*78:01-C*12:03-DRB1*04:04-DQB1*03:02 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
support@allelefrequencies.net