HLA > Allele Frequency Search > Classical

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Displaying 1 to 23 (from 23) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   DQA1*01  USA San Diego 3.6 0.0190496See
 2   DQA1*01:01  USA San Diego 20.9 0.1060496See
 3   DQA1*01:02  USA San Diego 36.3 0.2160496See
 4   DQA1*01:03  USA San Diego 11.8 0.0600496See
 5   DQA1*01:04  USA San Diego 0.8 0.0040496See
 6   DQA1*01:05  USA San Diego 0.5 0.0030496See
 7   DQA1*01:06  USA San Diego 0.3 0.0010496See
 8   DQA1*02:01  USA San Diego 21.7 0.1220496See
 9   DQA1*03  USA San Diego 5.8 0.0320496See
 10   DQA1*03:01  USA San Diego 22.8 0.1320496See
 11   DQA1*03:02  USA San Diego 1.4 0.0080496See
 12   DQA1*03:03  USA San Diego 3.0 0.0160496See
 13   DQA1*04:01  USA San Diego 6.3 0.0320496See
 14   DQA1*04:02  USA San Diego 0.3 0.0010496See
 15   DQA1*05  USA San Diego 4.4 0.0260496See
 16   DQA1*05:01  USA San Diego 29.4 0.1520496See
 17   DQA1*05:02  USA San Diego 0.3 0.0010496See
 18   DQA1*05:03  USA San Diego 1.1 0.0050496See
 19   DQA1*05:05  USA San Diego 7.1 0.0360496See
 20   DQA1*05:08  USA San Diego 0.3 0.0010496See
 21   DQA1*05:09  USA San Diego 0.5 0.0030496See
 22   DQA1*05:10  USA San Diego 0.8 0.0040496See
 23   DQA1*06:01  USA San Diego 3.6 0.0180496See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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