HLA > Allele Frequency Search > Classical

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Displaying 1 to 33 (from 33) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Allele
Frequency
(in_decimals)
Sample
Size
IMGT/HLA¹
Database
Distribution² Haplotype³
Association
Notesª
 1   DQB1*02:01:26  Pakistan Mixed Punjabi 0.2 0.0013389See
 2   DQB1*02:01:28  Pakistan Mixed Punjabi 0.2 0.0013389See
 3   DQB1*02:02:01:01  Pakistan Mixed Punjabi 12.2 0.0604389See
 4   DQB1*02:82  Pakistan Mixed Punjabi 0.2 0.0013389See
 5   DQB1*03:01:01:01  Pakistan Mixed Punjabi 19.3 0.1375389See
 6   DQB1*03:01:03  Pakistan Mixed Punjabi 0.6 0.0026389See
 7   DQB1*03:01:24  Pakistan Mixed Punjabi 1.0 0.0051389See
 8   DQB1*03:01:38  Pakistan Mixed Punjabi 0.4 0.0026389See
 9   DQB1*03:02:01:01  Pakistan Mixed Punjabi 5.5 0.0527389See
 10   DQB1*03:02:07  Pakistan Mixed Punjabi 0.2 0.0013389See
 11   DQB1*03:02:11  Pakistan Mixed Punjabi 0.2 0.0013389See
 12   DQB1*03:02:15  Pakistan Mixed Punjabi 0.2 0.0013389See
 13   DQB1*03:03:02:01  Pakistan Mixed Punjabi 4.4 0.0399389See
 14   DQB1*03:05:01  Pakistan Mixed Punjabi 0.8 0.0039389See
 15   DQB1*04:01:01:01  Pakistan Mixed Punjabi 0.6 0.0013389See
 16   DQB1*04:02:01:01  Pakistan Mixed Punjabi 1.6 0.0077389See
 17   DQB1*05:01:01:01  Pakistan Mixed Punjabi 14.1 0.0691389See
 18   DQB1*05:01:13  Pakistan Mixed Punjabi 0.2 0.0013389See
 19   DQB1*05:01:16  Pakistan Mixed Punjabi 0.2 0.0013389See
 20   DQB1*05:02:01:01  Pakistan Mixed Punjabi 6.4 0.0373389See
 21   DQB1*05:02:13  Pakistan Mixed Punjabi 1.6 0.0077389See
 22   DQB1*05:03:01:01  Pakistan Mixed Punjabi 14.9 0.0903389See
 23   DQB1*05:04  Pakistan Mixed Punjabi 0.2 0.0013389See
 24   DQB1*05:119  Pakistan Mixed Punjabi 0.2 0.0013389See
 25   DQB1*06:01:01:01  Pakistan Mixed Punjabi 21.0 0.1434389See
 26   DQB1*06:01:07  Pakistan Mixed Punjabi 0.2 0.0013389See
 27   DQB1*06:01:19  Pakistan Mixed Punjabi 0.2 0.0013389See
 28   DQB1*06:02:01:01  Pakistan Mixed Punjabi 2.7 0.0231389See
 29   DQB1*06:03:01:01  Pakistan Mixed Punjabi 11.5 0.0617389See
 30   DQB1*06:04:01  Pakistan Mixed Punjabi 0.2 0.0013389See
 31   DQB1*06:05:01  Pakistan Mixed Punjabi 0.6 0.0026389See
 32   DQB1*06:09:01:01  Pakistan Mixed Punjabi 2.2 0.0129389See
 33   DQB1*06:14:02  Pakistan Mixed Punjabi 0.2 0.0013389See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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