HLA > Allele Frequency Search > Non-Classical

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Displaying 1 to 16 (from 16) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Allele
Frequency
(in_decimals)
Sample
Size
IMGT/HLA¹
Database
Distribution² Haplotype³
Association
Notesª
 1   E*01:01  India Lucknow pop 2  0.7040120See
 2   E*01:03:01  India Lucknow pop 2  0.1170120See
 3   E*01:03:02  India Lucknow pop 2  0.1790120See
 4   E*01:04  India Lucknow pop 2  0120See
 5   G*01:01:01  India Lucknow pop 2  0.1000120See
 6   G*01:01:02  India Lucknow pop 2  0.1630120See
 7   G*01:01:03  India Lucknow pop 2  0.0500120See
 8   G*01:01:04  India Lucknow pop 2  0.0750120See
 9   G*01:01:05  India Lucknow pop 2  0120See
 10   G*01:01:07  India Lucknow pop 2  0120See
 11   G*01:01:08  India Lucknow pop 2  0120See
 12   G*01:02  India Lucknow pop 2  0.0130120See
 13   G*01:03  India Lucknow pop 2  0.2420120See
 14   G*01:04  India Lucknow pop 2  0.1750120See
 15   G*01:05N  India Lucknow pop 2  0.1540120See
 16   G*01:06  India Lucknow pop 2  0.0290120See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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