The Allele Frequency Net Database [Search HLA Allele Frequencies

HLA > Allele Frequency Search > Classical

Please specify your search by selecting options from boxes. Then, click "Search" to find HLA allele frequencies that match your criteria. Remember at least one option must be selected.


Locus: Starting Allele: Ending Allele: ï¿½ï¿½ (Type your allele e.g. A*01:01, etc. or leave both empty to include all alleles)
Select specific alleles (If you want to pick specific alleles, make sure your alleles are within the Start-End range above) Clear
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Population: Country: Source of dataset:
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Sample Size: Sample Year: Level of resolution : (Click here for further details)
Population standard: Gold only Gold and Silver All	Show frequencies: All Only positives Only negatives

Note: The aim of this search option is to display frequencies organised by population. If your selected criteria retrieves alleles that have been found in more than one hundred populations the number of columns will be limited. For a best view please reduce the number of populations to compare.

Line

Allele

Senegal Niokholo Mandenka (n=165)

Allele
Freq

A*01:01

0.027

A*01:02

0.016

A*02:01

0.081

A*02:02

0.091

A*02:05

0.011

A*02:06

0.005

A*03:01

0.038

A*23:01

0.177

A*24:02

0.005

A*26:01

0.043

A*29:02

0.038

A*30:01

0.038

A*30:02

0.124

A*30:08

0.005

A*31:01:02

0.005

A*32:01

0.011

A*33:01

0.027

A*33:03

0.081

A*34:02

0.022

A*66:02

0.005

A*68:01

0.070

A*68:02

0.016

A*68:04

0.005

A*74:01

0.022

A*80:01

0.038

Totals

1.001

Number of Alleles (k)

Heterozygosity (h)

0.0000

B*07:02

0.058

B*07:05

0.027

B*08:01

0.048

B*08:04

0.005

B*14:02

0.027

B*15:03

0.069

B*15:10

0.032

B*15:18

0.011

B*18:01

0.027

B*27:03

0.016

B*35:01

0.122

B*35:28

0.005

B*37:01

0.011

B*39:02

0.005

B*39:10

0.021

B*41:02

0.011

B*42:01

0.005

B*42:02

0.016

B*44:03

0.005

B*44:10

0.074

B*45:01

0.027

B*47:01

0.016

B*49:01

0.037

B*50:01

0.016

B*51:01:01

0.016

B*51:02:01

0.005

B*51:06

0.005

B*51:07

0.016

B*52:01:02

0.037

B*53:01

0.053

B*56:01

0.027

B*57:02

0.016

B*57:03

0.005

B*57:04

0.005

B*58:01

0.069

B*78:01

0.053

Totals

0.998

Number of Alleles (k)

Heterozygosity (h)

0.0000

C*01:02

0.031

C*01:03

0.000

C*02:02

0.071

C*03

0.154

C*03:02

0.067

C*03:03

0.000

C*03:04

0.074

C*04:01

0.195

C*04:03

0.000

C*04:05

0.000

C*05

0.033

C*05:03

0.000

C*05:09

0.000

C*06:02

0.039

C*07

0.108

C*07:01

0.087

C*07:02

0.021

C*07:03

0.000

C*07:04

0.000

C*07:05

0.000

C*07:07

0.000

C*07:09

0.000

C*07:10

0.000

C*08:01

0.000

C*08:02

0.028

C*08:03

0.000

C*08:04

0.000

C*12:02

0.000

C*12:03

0.018

C*12:04

0.003

C*12:05

0.000

C*14:02

0.000

C*14:03

0.006

C*15:02

0.034

C*15:03

0.000

C*15:04

0.000

C*15:05

0.000

C*15:06

0.000

100

C*16:01

0.168

101

C*16:02

0.000

102

C*16:04

0.000

103

C*17

0.049

104

C*18

0.025

Totals

1.211

Number of Alleles (k)

Heterozygosity (h)

0.8691

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Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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