Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
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Displaying 1 to 100 (from 150) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*24-B*39-DRB1*01-DQB1*05  Mexico Guanajuato, Guanajuato city 2.272722
 2  B*39-C*07-DRB1*01-DQA1*01-DQB1*05  Mexico Tapachula, Chiapas Mestizo Population 2.083372
 3  A*68-B*39-DRB1*01-DQB1*05  Mexico Sinaloa, Culiacán 1.9417103
 4  A*03-B*39-DRB1*01-DQB1*05  Mexico San Luis Potosi, San Luis Potosi city 1.666730
 5  A*24:02:01-B*39:01:01-C*05:01:01-DRB1*01:01:01-DQB1*05:01:01-DPA1*02:06-DPB1*05:01:01  Brazil Rio de Janeiro Black 1.470668
 6  A*68-B*39-C*07-DRB1*01-DQA1*01-DQB1*05  Mexico Tapachula, Chiapas Mestizo Population 1.388972
 7  A*02-B*39-DRB1*01-DQB1*05  Mexico Mexico City East 1.250079
 8  A*02:01:01-B*39:01:01-C*07:02:01-DRB1*01:01:01-DQB1*05:01:01-DPA1*02:06-DPB1*05:01:01  Brazil Rio de Janeiro Parda 1.1765170
 9  A*24-B*39-DRB1*01-DQB1*05  Mexico Colima Rural 1.136443
 10  A*02-B*39-C*07-DRB1*01-DQA1*01-DQB1*05  Mexico Tapachula, Chiapas Mestizo Population 0.694472
 11  A*68-B*39-DRB1*01-DQB1*05  Mexico Guanajuato, Leon 0.641078
 12  A*30-B*39-DRB1*01-DQB1*05  Mexico Mexico City East 0.625079
 13  A*68-B*39-DRB1*01-DQB1*05  Mexico Zacatecas, Zacatecas city 0.595284
 14  A*29:02:01-B*39:01:01-C*12:03:01-DRB1*01:01:01-DQB1*05:01:01-DPA1*03:01:01-DPB1*04:01:01  Brazil Rio de Janeiro Parda 0.5882170
 15  A*30-B*39-DRB1*01:03-DQB1*05  Mexico Aguascalientes state 0.526395
 16  A*01:01:01-B*39:01:01-C*12:03:01-DRB1*01:01:01-DQB1*05:01:01  Spain, Canary Islands, Gran canaria island 0.4700215
 17  A*02:01-B*39:01-C*12:03-E*01:03:01-F*01:01:02-G*01:01-DRB1*01:02-DQA1*01:01-DQB1*05:01  Portugal Azores Terceira Island 0.4386130
 18  A*30:01:01-B*39:01:01-C*06:02:01-DRB1*01:01:01-DQA1*01:03:01-DQB1*05:01-DPA1*01:03:01-DPB1*16:01  Russian Federation Vologda Region 0.4202119
 19  A*32:01:01-B*39:01:01-C*12:03:01-DRB1*01:01:01-DQA1*01:03:01-DQB1*05:01-DPA1*01:03:01-DPB1*04:01:01  Russian Federation Vologda Region 0.4202119
 20  A*68-B*39-DRB1*01-DQB1*05  Mexico Yucatan Rural 0.3731132
 21  A*02-B*39-DRB1*01-DQB1*05  Mexico Michoacan, Morelia 0.3311150
 22  A*11:01:01-B*39:01:01-C*12:03:01-DRB1*01:01:01-DQA1*01:01:01-DQB1*05:01-DPA1*01:03:01-DPB1*04:01  Russia Belgorod region 0.3268153
 23  A*32-B*39-DRB1*01-DQB1*05  Mexico Durango, Durango city 0.3226153
 24  A*24-B*39-DRB1*01-DQB1*05  Mexico Durango Rural 0.3058326
 25  A*11-B*39-DRB1*01-DQB1*05  Mexico Jalisco, Zapopan 0.2976168
 26  A*03-B*39-DRB1*01-DQB1*05  Mexico Veracruz, Veracruz city 0.2907171
 27  A*24:02:01-B*39:01:01-C*12:03:01-DRB1*01:01:01-DQB1*05:01:01  Spain, Canary Islands, Gran canaria island 0.2300215
 28  A*68:05-B*39:05-C*07:02-DRB1*01:02-DQA1*01:01-DQB1*05:01-DPA1*02:01-DPB1*17:01  Mexico Chiapas Lacandon Mayans 0.2294218
 29  A*30:02:01-B*39:08-C*04:01:01-DRB1*01:02:01-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.2262221
 30  A*24:02-B*39:06-C*02:02-DRB1*01:03-DQA1*01:01-DQB1*05:02-DPB1*01:01  Nicaragua Managua 0.2165339
 31  A*29:02-B*39:06-C*06:02-DRB1*01:02-DQA1*05:01-DQB1*05:01-DPB1*02:01  Nicaragua Managua 0.2165339
 32  A*68:07-B*39:08-C*07:02-DRB1*01:02-DQA1*05:01-DQB1*05:01-DPB1*04:02  Nicaragua Managua 0.2165339
 33  A*02-B*39-DRB1*01-DQB1*05  Mexico Oaxaca Rural 0.2053485
 34  A*24:02-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01-DPB1*04:02  Russia Karelia 0.20401,075
 35  A*02:01-B*39:01-C*01:02-DRB1*01:01:01-DQB1*05:01:01  England North West 0.2000298
 36  A*01:01:01-B*39:01:01-C*08:02:01-DRB1*01:01:01-DQB1*05:01:01-DPA1*03:01:01-DPB1*04:02:01  Brazil Rio de Janeiro Caucasian 0.1946521
 37  A*11:01:01-B*39:02:02-C*04:01:01-DRB1*01:01:01-DQB1*05:01:01-DPA1*01:03:01-DPB1*03:01:01  Brazil Rio de Janeiro Caucasian 0.1946521
 38  A*31:12-B*39:11-C*07:06-DRB1*01:02-DQB1*05:01-DPB1*04:02  Panama 0.1900462
 39  A*68-B*39-DRB1*01-DQB1*05  Mexico Zacatecas Rural 0.1859266
 40  A*24:02-B*39:01-DRB1*01:03-DQB1*05:01  Mexico Mexico City Tlalpan 0.1515330
 41  A*31:01-B*39:01-DRB1*01:02-DQB1*05:01  Mexico Mexico City Tlalpan 0.1515330
 42  A*33:01-B*39:01-DRB1*01:01-DQB1*05:01  Mexico Mexico City Tlalpan 0.1515330
 43  A*33:01-B*39:02-DRB1*01:02-DQB1*05:01  Mexico Mexico City Tlalpan 0.1515330
 44  A*34:04-B*39:02-DRB1*01:02-DQB1*05:01  Mexico Mexico City Tlalpan 0.1515330
 45  A*01-B*39-DRB1*01-DQB1*05  Mexico Michoacan Rural 0.1433348
 46  A*02:01-B*39:01-C*12:03-DRB1*01:01-DQB1*05:01  Italy pop 5 0.1400975
 47  A*24:02-B*39:01-C*12:03-DRB1*01:01-DQB1*05:01  Italy pop 5 0.1400975
 48  A*30-B*39-DRB1*01-DQB1*05  Mexico Coahuila, Torreon 0.1250396
 49  A*33-B*39-DRB1*01-DQB1*05  Mexico Coahuila, Torreon 0.1250396
 50  A*68-B*39-DRB1*01-DQB1*05  Mexico Tlaxcala Rural 0.1205830
 51  A*02-B*39-DRB1*01-DQB1*05  Mexico Nuevo Leon Rural 0.1136439
 52  A*33-B*39-DRB1*01-DQB1*05  Mexico Nuevo Leon Rural 0.1136439
 53  A*25-B*39-DRB1*01-DQB1*05  Mexico Oaxaca Rural 0.1027485
 54  A*24-B*39-DRB1*01-DQB1*05  Mexico Puebla, Puebla city 0.10021,994
 55  A*02:01-B*39:01-C*12:03-DRB1*01:01-DQB1*05:01  USA Hispanic pop 2 0.09401,999
 56  A*33-B*39-DRB1*01-DQB1*05  Mexico Veracruz Rural 0.0924539
 57  A*11:01-B*39:01-C*12:03-DRB1*01:01-DQA1*01:01-DQB1*05:01-DPB1*04:02  Sri Lanka Colombo 0.0700714
 58  A*03-B*39-C*07-DRB1*01-DQB1*05-DPB1*04  Norway ethnic Norwegians 0.07004,510
 59  A*03:01-B*39:01-C*12:03-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.06804,335
 60  A*24:02-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.06804,335
 61  A*24:02-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01-DPB1*04:01  Russia Karelia 0.06731,075
 62  A*02-B*39-DRB1*01-DQB1*05  Mexico Mexico City North 0.0664751
 63  A*02:01-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01-DPB1*03:01  Russia Karelia 0.06331,075
 64  A*02-B*39-DRB1*01-DQB1*05  Ecuador Andes Mixed Ancestry 0.0607824
 65  A*24-B*39-DRB1*01-DQB1*05  Ecuador Andes Mixed Ancestry 0.0607824
 66  A*02-B*39-DRB1*01-DQB1*05  Mexico Tlaxcala Rural 0.0602830
 67  A*02:06-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01-DPB1*02:01  Russia Karelia 0.05651,075
 68  A*24:02-B*39:01-C*07:02-DRB1*01:01-DQB1*05:04-DPB1*02:01  Russia Karelia 0.05641,075
 69  A*30:02-B*39:01-C*12:03-DRB1*01:01-DQB1*05:01  USA Hispanic pop 2 0.04701,999
 70  A*02-B*39-C*12-DRB1*01-DQA1*01-DQB1*05  Spain, Castilla y Leon, Northwest, 0.04661,743
 71  A*24:02-B*39:06-C*07:02-DRB1*01:01-DQB1*05:01-DPB1*04:01  Germany DKMS - German donors 0.04573,456,066
 72  A*01:01-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01  USA Asian pop 2 0.04401,772
 73  A*32:01-B*39:10-C*12:03-DRB1*01:02-DQB1*05:01  USA African American pop 4 0.04402,411
 74  A*02:01-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01  Germany DKMS - Italy minority 0.04301,159
 75  A*24:02-B*39:06-C*07:02-DRB1*01:01-DQB1*05:01  Germany DKMS - Italy minority 0.04301,159
 76  A*32:01-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01  Germany DKMS - Italy minority 0.04301,159
 77  A*02-B*39-DRB1*01-DQB1*05  Ecuador Mixed Ancestry 0.04261,173
 78  A*24-B*39-DRB1*01-DQB1*05  Ecuador Mixed Ancestry 0.04261,173
 79  A*24-B*39-DRB1*01:03-DQB1*05  Mexico Jalisco, Guadalajara city 0.04191,189
 80  A*24-B*39-DRB1*01-DQB1*05  Mexico Jalisco, Guadalajara city 0.04191,189
 81  A*02:22-B*39:06-C*03:04-DRB1*01:01-DQB1*05:01  Colombia Bogotá Cord Blood 0.03421,463
 82  A*68:02-B*39:01-C*07:02-DRB1*01:02-DQB1*05:01  Colombia Bogotá Cord Blood 0.03421,463
 83  A*01:01-B*39:01-C*12:03-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 84  A*02:01-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 85  A*02:01-B*39:01-C*12:03-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 86  A*02:01-B*39:06-C*07:02-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 87  A*03:01-B*39:01-C*05:01-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 88  A*11:01-B*39:06-C*07:02-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 89  A*24:02-B*39:06-C*07:02-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 90  A*25:01-B*39:01-C*12:03-DRB1*01:01-DQB1*05:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 91  A*02:01:01:01-B*39:01:01:03-C*02:02:02-DRB1*01:01:01-DQB1*05:01  Russia Nizhny Novgorod, Russians 0.03311,510
 92  A*32:01:01-B*39:01:01-C*12:03:01:01-DRB1*01:01:01-DQB1*05:01  Russia Nizhny Novgorod, Russians 0.03311,510
 93  A*02-B*39-C*07-DRB1*01-DQA1*01-DQB1*05  Spain, Castilla y Leon, Northwest, 0.03281,743
 94  A*24-B*39-C*07-DRB1*01-DQA1*01-DQB1*05  Spain, Castilla y Leon, Northwest, 0.03281,743
 95  A*31-B*39-C*12-DRB1*01-DQA1*01-DQB1*05  Spain, Castilla y Leon, Northwest, 0.03281,743
 96  A*02:01-B*39:01-C*07:02-DRB1*01:01-DQB1*05:01-DPB1*02:01  Germany DKMS - German donors 0.03213,456,066
 97  A*68:01-B*39:01-C*12:03-DRB1*01:01-DQB1*05:01  Germany DKMS - Turkey minority 0.03104,856
 98  A*23-B*39-C*12-DRB1*01-DQA1*01-DQB1*05  Spain, Castilla y Leon, Northwest, 0.03071,743
 99  A*02:01-B*39:01-C*07:02-DRB1*01:01-DQA1*01:01-DQB1*05:01-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 100  A*11:01:01-B*39:01:03-C*07:43:01-DRB1*01:01:01-DQB1*05:01:01  China Zhejiang Han 0.02881,734

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 150) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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