Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

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Displaying 1 to 100 (from 181) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*39:01-DRB1*15:01:01  Taiwan Saisiat 3.000051
 2  A*26:01-B*39:01-DRB1*15:01  New Zealand Polynesians with Full Ancestry 2.381021
 3  A*26:01-B*39:01-DRB1*15:01  New Zealand Polynesians with Admixed History 1.852027
 4  A*31:01:02-B*39:01:01-DRB1*15:01:01  Portugal North 1.100046
 5  A*68:01-B*39:01-DRB1*15:01-DQB1*06:02  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 6  A*11:02:01-B*39:01:01-C*04:03:01-DRB1*15:01:01-DQB1*06:02:01  Vietnam Kinh 0.4950101
 7  A*02:06-B*39:01-C*07:02-DRB1*15:01  Japan pop 16 0.386018,604
 8  A*24:02-B*39:01-C*07:02-DRB1*15:01-DQB1*06:02  Mexico Mexico City Mestizo population 0.3497143
 9  B*39:01-C*07:02-DRB1*15:01-DQB1*06:02  Mexico Mexico City Mestizo population 0.3497143
 10  A*02:01:01-B*39:01:01-C*12:03:01-DRB1*15:01:01-DQB1*06:02:01-DPA1*01:03:01-DPB1*04:01:01  Brazil Barra Mansa Rio State Caucasian 0.3125405
 11  A*02:03:01-B*39:01:01-C*07:02:01-DRB1*15:01:01-DQB1*06:01:01  India Karnataka Kannada Speaking 0.2870174
 12  A*02:06-B*39:01-C*07:02-DRB1*15:01-DQB1*06:02  USA NMDP Hawaiian or other Pacific Islander 0.255311,499
 13  A*02:06-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.20003,078
 14  A*24:02-B*39:01-C*12:03-DRB1*15:01-DQB1*06:02:01  England North West 0.2000298
 15  A*24:02-B*39:01-DRB1*15:01-DQB1*06:02  Mexico Mexico City Tlalpan 0.1515330
 16  A*02:01-B*39:01-C*07:02-DRB1*15:01  Japan pop 16 0.151018,604
 17  A*31:01-B*39:01-C*07:02-DRB1*15:01  Japan pop 16 0.110018,604
 18  A*02:01-B*39:01-C*02:02-DRB1*15:01  Germany DKMS - United Kingdom minority 0.09601,043
 19  A*26:01-B*39:01-C*07:02-DRB1*15:01  Japan pop 16 0.083018,604
 20  A*24:02-B*39:01-C*07:02-DRB1*15:01  Germany DKMS - China minority 0.07801,282
 21  A*03:01-B*39:01-C*07:02-DRB1*15:01  Germany DKMS - Netherlands minority 0.07301,374
 22  A*24:02-B*39:01-C*07:02-DRB1*15:01  Japan pop 16 0.073018,604
 23  A*24:02-B*39:01-C*12:03-DRB1*15:01-DQA1*03:01-DQB1*06:01-DPB1*02:01  Sri Lanka Colombo 0.0700714
 24  A*02:01-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 25  A*02:06-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:01-DPB1*13:01  Japan pop 17 0.07003,078
 26  A*02:06-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 27  A*24:02-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 28  A*26:01-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 29  A*11:01-B*39:01-C*07:02-DRB1*15:01  Hong Kong Chinese BMDR 0.06357,595
 30  A*11:01-B*39:01-C*07:02-DRB1*15:01  Japan pop 16 0.063018,604
 31  A*11:02-B*39:01-DRB1*15:01  Hong Kong Chinese cord blood registry 0.05603,892
 32  A*11:02-B*39:01-C*07:02-DRB1*15:01  Hong Kong Chinese BMDR 0.05337,595
 33  A*31:01-B*39:01-C*12:03-DRB1*15:01-DQB1*06:02  Germany DKMS - Italy minority 0.05201,159
 34  A*02:01-B*39:01-C*12:03-DRB1*15:01  Germany DKMS - Croatia minority 0.05102,057
 35  A*11:01-B*39:01-DRB1*15:01  Hong Kong Chinese cord blood registry 0.05043,892
 36  A*02:01-B*39:01-C*12:03-DRB1*15:01  Germany DKMS - Bosnia and Herzegovina minority 0.04901,028
 37  A*68:01-B*39:01-C*07:02-DRB1*15:01  Germany DKMS - Bosnia and Herzegovina minority 0.04901,028
 38  A*11:01-B*39:01-C*07:02-DRB1*15:01-DQB1*06:02  USA Hispanic pop 2 0.04701,999
 39  A*29:01-B*39:01-C*04:01-DRB1*15:01-DQB1*05:02  USA Hispanic pop 2 0.04701,999
 40  A*03:01-B*39:01-C*12:03-DRB1*15:01  Germany DKMS - Croatia minority 0.04602,057
 41  A*01:01-B*39:01-C*12:03-DRB1*15:01-DQB1*06:02  USA African American pop 4 0.04402,411
 42  A*24:02-B*39:01-C*07:02-DRB1*15:01-DQB1*05:02  USA Asian pop 2 0.04401,772
 43  A*02:01-B*39:01-C*12:03-DRB1*15:01  Germany DKMS - Portugal minority 0.04301,176
 44  A*26:01-B*39:01-C*03:04-DRB1*15:01  Germany DKMS - Portugal minority 0.04301,176
 45  A*31:01-B*39:01-C*12:03-DRB1*15:01  Germany DKMS - Romania minority 0.04101,234
 46  A*32:01-B*39:01-C*07:02-DRB1*15:01  Germany DKMS - Romania minority 0.04101,234
 47  A*02:01-B*39:01-C*07:02-DRB1*15:01  Hong Kong Chinese BMDR 0.03927,595
 48  A*24:02:01-B*39:01:01-C*12:03:01:01-DRB1*15:01:01-DQB1*06:02:01  Russia Nizhny Novgorod, Russians 0.03911,510
 49  A*02:01-B*39:01-C*07:02-DRB1*15:01  Germany DKMS - France minority 0.03601,406
 50  A*02:01-B*39:01-C*07:02-DRB1*15:01  Germany DKMS - Austria minority 0.03601,698
 51  A*11:01-B*39:01-C*07:02-DRB1*15:01  Germany DKMS - Netherlands minority 0.03601,374
 52  A*68:01-B*39:01-C*07:02-DRB1*15:01  Germany DKMS - France minority 0.03601,406
 53  A*24:02-B*39:01-DRB1*15:01  Hong Kong Chinese cord blood registry 0.03573,892
 54  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*15:01:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03425,266
 55  A*31:01:02:01-B*39:01:01:03-C*07:02:01-DRB1*15:01:01-DQB1*06:03:01  Russia Nizhny Novgorod, Russians 0.03311,510
 56  A*68:24-B*39:01:01-C*12:03:01:01-DRB1*15:01:01-DQB1*06:02:01  Russia Nizhny Novgorod, Russians 0.03311,510
 57  A*02:01-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*02:02  Japan pop 17 0.03003,078
 58  A*02:01-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:01-DPB1*13:01  Japan pop 17 0.03003,078
 59  A*02:06-B*39:01-C*03:04-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:02-DPB1*02:01  Japan pop 17 0.03003,078
 60  A*11:01-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*03:01  Japan pop 17 0.03003,078
 61  A*24:02-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:01-DPB1*13:01  Japan pop 17 0.03003,078
 62  A*24:02-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 63  A*24:20-B*39:01-C*12:03-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 64  A*26:01-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*03:01  Japan pop 17 0.03003,078
 65  A*31:01-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 66  A*31:01-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:01-DPB1*09:01  Japan pop 17 0.03003,078
 67  A*31:01-B*39:01-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 68  A*01:01-B*39:01-C*12:03-DRB1*15:01  Germany DKMS - Austria minority 0.02901,698
 69  A*01:01-B*39:01-DRB1*15:01  Israel Argentina Jews 0.02904,307
 70  A*02:01:01-B*39:01:01-C*03:04:01-DRB1*15:01:01-DQB1*05:02:01  China Zhejiang Han 0.02881,734
 71  A*02:03:01-B*39:01:01-C*07:02:01-DRB1*15:01:01-DQB1*06:02:01  China Zhejiang Han 0.02881,734
 72  A*26:01:01-B*39:01:01-C*03:03:01-DRB1*15:01:01-DQB1*05:02:01  China Zhejiang Han 0.02881,734
 73  A*31:01:02-B*39:01:01-C*03:04:01-DRB1*15:01:01-DQB1*06:02:01  China Zhejiang Han 0.02881,734
 74  A*02:06-B*39:01-DRB1*15:01  Hong Kong Chinese cord blood registry 0.02533,892
 75  A*02:01-B*39:01-DRB1*15:01  Hong Kong Chinese cord blood registry 0.02103,892
 76  A*01:01-B*39:01-C*12:04-DRB1*15:01-DQB1*06:02  India East UCBB 0.02082,403
 77  A*31:01-B*39:01-C*07:02-DRB1*15:01-DQB1*06:01  India East UCBB 0.02082,403
 78  A*03:01-B*39:01-C*12:03-DRB1*15:01-DQB1*06:48  India Tamil Nadu 0.02012,492
 79  A*24:03-B*39:01-C*12:04-DRB1*15:01-DQB1*06:01  India Tamil Nadu 0.02012,492
 80  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*15:01:01-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.01955,266
 81  A*11:01-B*39:01-C*07:02-DRB1*15:01-DQB1*06:02-DPB1*04:01  Germany DKMS - German donors 0.01943,456,066
 82  A*03:01:01-B*39:01:01-C*12:03:01-DRB1*15:01:01-DQB1*06:02:01  Poland BMR 0.019223,595
 83  A*31:01-B*39:01-C*12:03-DRB1*15:01  Poland DKMS 0.019120,653
 84  A*03:01-B*39:01-C*12:03-DRB1*15:01  Poland DKMS 0.018120,653
 85  A*02:01-B*39:01-DRB1*15:01  Israel Kavkazi Jews 0.01762,840
 86  A*02:06-B*39:01-C*03:04-DRB1*15:01  Hong Kong Chinese BMDR 0.01747,595
 87  A*24:02-B*39:01-C*12:04-DRB1*15:01-DQB1*06:01  India West UCBB 0.01725,829
 88  A*31:01:02-B*39:01:01-C*12:03:01-DRB1*15:01:01-DQB1*06:02:01  Poland BMR 0.017023,595
 89  A*26:03-B*39:01-C*07:02-DRB1*15:01  Japan pop 16 0.016018,604
 90  A*24:02:01-B*39:01:01-C*12:03:01-DRB1*15:01:01-DQB1*06:02:01  Poland BMR 0.013823,595
 91  A*32:01-B*39:01-DRB1*15:01  Israel Iraq Jews 0.013513,270
 92  A*02:03-B*39:01-C*12:04-DRB1*15:01-DQB1*06:02  India South UCBB 0.013111,446
 93  A*24:33-B*39:01-C*12:04-DRB1*15:01-DQB1*06:01  India South UCBB 0.013111,446
 94  A*24:02-B*39:01-C*07:02-DRB1*15:01  Hong Kong Chinese BMDR 0.01307,595
 95  A*02:01-B*39:01-DRB1*15:01  Israel Iran Jews 0.01238,153
 96  A*02:06-B*39:01-C*07:02-DRB1*15:01-DQB1*06:02  USA Hispanic pop 2 0.01201,999
 97  A*25:01-B*39:01-C*07:02-DRB1*15:01-DQB1*06:02  USA Hispanic pop 2 0.01201,999
 98  A*02:01-B*39:01-DRB1*15:01  Israel USSR Jews 0.011945,681
 99  A*11:01-B*39:01-C*15:02-DRB1*15:01-DQB1*06:02  India Central UCBB 0.01194,204
 100  A*24:02-B*39:01-C*12:03-DRB1*15:01-DQB1*06:01  India Central UCBB 0.01194,204

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 181) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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