Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 90 (from 90) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  DQA1*01:02-DQB1*06:09  Ecuador African 8.600058
 2  DQA1*01:02-DQB1*06:09  Tunisia 6.1000100
 3  DQA1*01:02-DQB1*06:09  Gambia 4.4000146
 4  DQA1*01:02-DQB1*06:09  Uganda Baganda 4.300047
 5  DQA1*01:02-DQB1*06:09  China, Xinjiang Uyghur Autonomous Region Han 4.290070
 6  DQA1*01:02-DQB1*06:09  Russia Tuva pop 2 4.1000169
 7  DQA1*01:02-DQB1*06:09  China, Xinjiang Uyghur Autonomous Region Hui 3.750040
 8  DRB1*13:02-DQA1*01:02:01-DQB1*06:09  South Korea pop 5 3.6000467
 9  DQA1*01:02-DQB1*06:09  Cameroon Saa 3.5000172
 10  DRB1*13:02-DQA1*01:02-DQB1*06:09  Congo Kinshasa Bantu 3.400090
 11  DRB1*13:02-DQA1*01:02-DQB1*06:09  Tunisia 3.0000100
 12  DQA1*01:02-DQB1*06:09  China, Xinjiang Uyghur Autonomous Region Kazakh 2.880052
 13  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  South Korea pop 11 2.1000149
 14  DRB1*13:02-DQA1*01:02-DQB1*06:09  Cameroon Yaounde 1.600092
 15  DQA1*01:02-DQB1*06:09  China, Xinjiang Uyghur Autonomous Region Uyghur 1.410071
 16  DRB1*13:02-DQA1*01:02-DQB1*06:09  USA San Francisco Caucasian 1.4000220
 17  A*68:02-B*53:01-C*04:01-DRB1*13:02-DQA1*01:02-DQB1*06:09  Kosovo 1.2100124
 18  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  South Korea pop 2 1.2000207
 19  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*05:01  South Korea pop 11 1.1000149
 20  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*09:01  China Canton Han 1.1000264
 21  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*02:01  China Zhejiang Han pop 2 0.8394833
 22  A*33:03-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*03:01  Sri Lanka Colombo 0.7703714
 23  DRB1*13:02-DQA1*01:02-DQB1*06:09  USA European American 0.71001,899
 24  DQA1*01:02-DQB1*06:09-DPA1*02:01-DPB1*09:01  Hong Kong Chinese HKBMDR. DQ and DP 0.59001,064
 25  A*03:01-B*14:02-C*08:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*05:01  USA San Diego 0.5210496
 26  A*01:01-B*45:01-C*06:02-DRB1*07:01-DQA1*01:02-DQB1*06:09-DPB1*03:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 27  A*01:01-B*81:01-C*18:01-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 28  A*02:01-B*07:05-C*15:05-DRB1*03:01-DQA1*01:02-DQB1*06:09-DPB1*17:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 29  A*23:01-B*57:02-C*07:01-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*34:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 30  A*29:02-B*15:03-C*02:10-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 31  A*32:01-B*07:02-C*07:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 32  A*32:01-B*15:31-C*04:07-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*39:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 33  A*66:01-B*58:02-C*06:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 34  A*68:02-B*15:31-C*04:07-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*39:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 35  A*33:03-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  Sri Lanka Colombo 0.4902714
 36  A*02:01-B*15:03-C*02:02-E*01:01:01-F*01:01:01-G*01:01-DRB1*13:02:01-DQA1*01:02-DQB1*06:09  Portugal Azores Terceira Island 0.4386130
 37  A*02:01-B*58:01-C*03:04-E*01:03:02-F*01:03:01-G*01:01-DRB1*13:02-DQA1*01:02-DQB1*06:09  Portugal Azores Terceira Island 0.4386130
 38  A*24:02-B*15:01-C*03:03-E*01:01:01-F*01:01:01-G*01:04-DRB1*13:02:01-DQA1*01:02-DQB1*06:09  Portugal Azores Terceira Island 0.4386130
 39  A*02:01:01-B*14:02:01-C*08:02:01-DRB1*13:02:01-DQA1*01:02:01-DQB1*06:09:01-DPA1*02:02:02-DPB1*04:01:01  Russian Federation Vologda Region 0.4202119
 40  A*33:03:01-B*58:01:01-C*03:02:02-DRB1*13:02:01-DQA1*01:02:01-DQB1*06:09:01-DPA1*01:03:01-DPB1*02:01  Russian Federation Vologda Region 0.4202119
 41  A*68:01:02-B*18:01:01-C*07:04:01-DRB1*13:02:01-DQA1*01:02:01-DQB1*06:09:01-DPA1*02:02:02-DPB1*04:01:01  Russian Federation Vologda Region 0.4202119
 42  A*24:02-B*53:01-C*04:01-DRB1*13:02-DQA1*01:02-DQB1*06:09  Kosovo 0.4030124
 43  DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*02:01  Hong Kong Chinese HKBMDR. DQ and DP 0.34231,064
 44  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*02:01-DPB1*13:01  China Zhejiang Han pop 2 0.3001833
 45  A*29:01-B*18:01-C*07:04-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  South Africa Worcester 0.3000159
 46  A*68:02-B*42:01-C*17:01-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  South Africa Worcester 0.3000159
 47  A*68:02-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*03:01  South Africa Worcester 0.3000159
 48  A*68:02-B*58:02-C*06:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  South Africa Worcester 0.3000159
 49  A*74:01-B*42:01-C*17:01-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*105:01  South Africa Worcester 0.3000159
 50  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*04:01  China Zhejiang Han pop 2 0.2711833
 51  A*33:03-B*35:01-C*04:01-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  USA San Diego 0.2600496
 52  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*104:01  China Zhejiang Han pop 2 0.2401833
 53  DQA1*01:02-DQB1*06:09-DPA1*02:01-DPB1*13:01  Hong Kong Chinese HKBMDR. DQ and DP 0.22041,064
 54  DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*04:01  Hong Kong Chinese HKBMDR. DQ and DP 0.21661,064
 55  A*23:01-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  Nicaragua Managua 0.2165339
 56  A*29:02-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  Nicaragua Managua 0.2165339
 57  A*33:03-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*04:01  Sri Lanka Colombo 0.2101714
 58  A*33:03-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*03:01  Japan pop 17 0.16003,078
 59  A*01-B*58-DRB1*13:02-DQA1*01:02-DQB1*06:09  Brazil Paraná Caucasian 0.1560641
 60  A*24-B*58-DRB1*13:02-DQA1*01:02-DQB1*06:09  Brazil Paraná Caucasian 0.1560641
 61  A*24:02-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*09:01  Sri Lanka Colombo 0.1401714
 62  A*33:03-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*09:01  Sri Lanka Colombo 0.1401714
 63  A*33:03-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*02:01  Japan pop 17 0.13003,078
 64  A*33:03-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*02:02-DPB1*05:01  Japan pop 17 0.10003,078
 65  DQA1*01:02-DQB1*06:09-DPA1*02:02-DPB1*05:01  Hong Kong Chinese HKBMDR. DQ and DP 0.09841,064
 66  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*02:02-DPB1*05:01  China Zhejiang Han pop 2 0.0909833
 67  A*01-B*35-DRB1*13:02-DQA1*01:02-DQB1*06:09  Brazil Paraná Caucasian 0.0780641
 68  A*02-B*35-DRB1*13:02-DQA1*01:02-DQB1*06:09  Brazil Paraná Caucasian 0.0780641
 69  A*02-B*57-DRB1*13:02-DQA1*01:02-DQB1*06:09  Brazil Paraná Caucasian 0.0780641
 70  A*30-B*15-DRB1*13:02-DQA1*01:02-DQB1*06:09  Brazil Paraná Caucasian 0.0780641
 71  A*34-B*44-DRB1*13:02-DQA1*01:02-DQB1*06:09  Brazil Paraná Caucasian 0.0780641
 72  A*68-B*14-DRB1*13:02-DQA1*01:02-DQB1*06:09  Brazil Paraná Caucasian 0.0780641
 73  A*01:01-B*51:01-C*16:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*04:01  Sri Lanka Colombo 0.0700714
 74  A*23:01-B*58:01-C*03:02-DRB1*15:01-DQA1*01:02-DQB1*06:09-DPB1*117:01  Sri Lanka Colombo 0.0700714
 75  A*24:07-B*58:01-C*07:01-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*10:01  Sri Lanka Colombo 0.0700714
 76  A*24:17-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  Sri Lanka Colombo 0.0700714
 77  A*31:01-B*18:01-C*04:01-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*15:01  Sri Lanka Colombo 0.0700714
 78  A*32:01-B*35:01-C*04:01-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  Sri Lanka Colombo 0.0700714
 79  A*33:03-B*40:01-C*03:04-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPB1*02:01  Sri Lanka Colombo 0.0700714
 80  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*03:01  China Zhejiang Han pop 2 0.0600833
 81  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*41:01  China Zhejiang Han pop 2 0.0600833
 82  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*02:01-DPB1*14:01  China Zhejiang Han pop 2 0.0600833
 83  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*02:02-DPB1*02:02  China Zhejiang Han pop 2 0.0600833
 84  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*02:02-DPB1*03:01  China Zhejiang Han pop 2 0.0600833
 85  DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*04:02  China Zhejiang Han pop 2 0.0591833
 86  DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*04:02  Hong Kong Chinese HKBMDR. DQ and DP 0.03851,064
 87  A*02:01-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 88  A*24:02-B*58:01-C*03:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 89  A*31:01-B*51:01-C*14:02-DRB1*13:02-DQA1*01:02-DQB1*06:09-DPA1*01:03-DPB1*04:01  Japan pop 17 0.03003,078
 90  DQA1*01:02-DQB1*06:09-DPA1*02:02-DPB1*02:02  Hong Kong Chinese HKBMDR. DQ and DP 0.02491,064

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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