 | | USA San Francisco Caucasian | | Polymorphic Region: | HLA |
Demographic Data
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Ethnic origin: |
Caucasoid |
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Geographic Region: |
North America |
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Latitude: |
37º 46' N
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Longitude: |
122º 25' W
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Family: |
Not Known |
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Urban/Rural: |
Urban |
Sample Data
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Sample Size: |
220
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Test date: |
2011 |
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Method(s): |
Sequencing, Other
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Source: |
Controls for Disease Study |
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Loci typed: |
A , B, C, DPB1, DQA1, DQB1, DRB1, DRB3 , DRB4, DRB5
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Additional notes: |
Tested by NGS
To gain further insight into the role of HLA alleles in lymphomagenesis and to investigate the independence of validated SNPs and HLA alleles with follicular lymphoma risk, high-resolution HLA typing was conducted using next-generation sequencing in 222 non-Hispanic White FL cases and 220 matched controls from a larger San Francisco Bay Area population-based case-control study of lymphoma. |
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Bibliographic Reference
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Author(s): |
Christine Skibola |
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Publication details: |
Skibola CF, Akers NK, Conde L, Ladner M, Hawbecker SK, Cohen F, Ribas F, Erlich HA, Goodridge D, Trachtenberg EA, Smith MT, Bracci PM. "Multi-locus HLA class I and II allele and haplotype associations with follicular lymphoma". Tissue antigens. 79(4):279-86, 2012.
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Author's e-mail: |
lconde@uab.edu |
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Frequency Data
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Allele Frequencies