HLA > Allele Frequency Search > Classical

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Displaying 1 to 16 (from 16) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   DQB1*02:01  Nicaragua Managua 8.5 0.0444339See
 2   DQB1*02:02  Nicaragua Managua 15.4 0.0811339See
 3   DQB1*03:01  Nicaragua Managua 32.0 0.1776339See
 4   DQB1*03:02  Nicaragua Managua 51.0 0.3282339See
 5   DQB1*03:03  Nicaragua Managua 2.7 0.0154339See
 6   DQB1*03:04  Nicaragua Managua 1.2 0.0058339See
 7   DQB1*04:02  Nicaragua Managua 14.7 0.0753339See
 8   DQB1*05:01  Nicaragua Managua 18.9 0.1023339See
 9   DQB1*05:02  Nicaragua Managua 4.2 0.0212339See
 10   DQB1*05:03  Nicaragua Managua 4.2 0.0251339See
 11   DQB1*06:01  Nicaragua Managua 1.2 0.0077339See
 12   DQB1*06:02  Nicaragua Managua 13.1 0.0695339See
 13   DQB1*06:03  Nicaragua Managua 4.6 0.0251339See
 14   DQB1*06:04  Nicaragua Managua 2.7 0.0135339See
 15   DQB1*06:05  Nicaragua Managua 0.4 0.0039339See
 16   DQB1*06:09  Nicaragua Managua 0.8 0.0039339See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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