Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 92 (from 92) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*02:01-B*40:01-C*07:02-DRB1*12:01-DQB1*03:01  Malaysia Peninsular Chinese 0.5155194
 2  A*02:01-B*40:01-C*03:04-DRB1*12:02-DQB1*03:01  Malaysia Peninsular Chinese 0.2577194
 3  A*02:01-B*40:06-C*08:01-DRB1*12:01-DQB1*03:01  Malaysia Peninsular Chinese 0.2577194
 4  A*02:01-B*40:06-C*15:02-DRB1*12:02-DQB1*05:03  Malaysia Peninsular Chinese 0.2577194
 5  A*02:01-B*40:01-DRB1*12:02  Hong Kong Chinese cord blood registry 0.24973,892
 6  A*02:01-B*40:06-C*15:02-DRB1*12:02-DQB1*03:01  Malaysia Peninsular Indian 0.1845271
 7  A*02:01-B*40:01-DRB1*12:01  Hong Kong Chinese cord blood registry 0.14193,892
 8  A*02:01-B*40:01-C*03:04-DRB1*12:02  Hong Kong Chinese BMDR 0.11117,595
 9  A*02:01-B*40:03-C*03:04-DRB1*12:02-DQB1*03:01  USA Asian pop 2 0.08901,772
 10  A*02:01:01-B*40:01:02-C*08:01:01-DRB1*12:01:01-DQB1*03:01:01  China Zhejiang Han 0.08651,734
 11  A*02:01-B*40:01-C*07:02-DRB1*12:02  Hong Kong Chinese BMDR 0.08447,595
 12  A*02:01-B*40:01-C*07:02-DRB1*12:01  Hong Kong Chinese BMDR 0.07887,595
 13  A*02:01-B*40:01-C*03:04-DRB1*12:01  Germany DKMS - China minority 0.07801,282
 14  A*02:01-B*40:02-C*02:02-DRB1*12:01  Germany DKMS - France minority 0.07101,406
 15  A*02:01-B*40:01-C*03:04-DRB1*12:01-DQB1*03:01-DPB1*02:01  Russia Karelia 0.05651,075
 16  A*02:01:01-B*40:01:02-C*07:02:01-DRB1*12:01:01-DQB1*03:01:01  China Zhejiang Han 0.04981,734
 17  A*02:01-B*40:01-C*03:04-DRB1*12:02-DQB1*03:01  USA Asian pop 2 0.04401,772
 18  A*02:01-B*40:01-C*07:02-DRB1*12:02-DQB1*03:01  USA Asian pop 2 0.04401,772
 19  A*02:01-B*40:02-C*03:04-DRB1*12:01-DQB1*04:02  USA Asian pop 2 0.04401,772
 20  A*02:01-B*40:06-C*08:01-DRB1*12:01-DQB1*03:01  India East UCBB 0.04162,403
 21  A*02:01-B*40:01-C*01:02-DRB1*12:02  Germany DKMS - China minority 0.03901,282
 22  A*02:01-B*40:01-C*03:04-DRB1*12:02  Germany DKMS - China minority 0.03901,282
 23  A*02:01-B*40:02-C*03:04-DRB1*12:02  Germany DKMS - China minority 0.03901,282
 24  A*02:01-B*40:02-C*07:56-DRB1*12:01  Germany DKMS - China minority 0.03901,282
 25  A*02:01-B*40:03-C*03:03-DRB1*12:02  Germany DKMS - China minority 0.03901,282
 26  A*02:01-B*40:06-C*15:02-DRB1*12:01  Germany DKMS - China minority 0.03901,282
 27  A*02:01-B*40:02-DRB1*12:02  Hong Kong Chinese cord blood registry 0.03833,892
 28  A*02:01-B*40:01-C*03:04-DRB1*12:01  Hong Kong Chinese BMDR 0.03797,595
 29  A*02:01:01-B*40:01:02-C*03:04:01-DRB1*12:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03725,266
 30  A*02:01-B*40:01-C*07:02-DRB1*12:01  Japan pop 16 0.037018,604
 31  A*02:01-B*40:01-C*03:04-DRB1*12:01  Germany DKMS - France minority 0.03601,406
 32  A*02:01-B*40:01-DRB1*12:01  Israel USSR Jews 0.035145,681
 33  A*02:01-B*40:01-C*07:02-DRB1*12:01-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 34  A*02:01-B*40:02-C*01:02-DRB1*12:01-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 35  A*02:01-B*40:02-C*03:03-DRB1*12:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 36  A*02:01-B*40:06-C*08:01-DRB1*12:02-DQA1*06:01-DQB1*03:01-DPA1*02:01-DPB1*14:01  Japan pop 17 0.03003,078
 37  A*02:01:01-B*40:01:02-C*03:04:01-DRB1*12:01:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 38  A*02:01:01-B*40:01:02-C*04:01:01-DRB1*12:02:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 39  A*02:01:01-B*40:01:02-C*07:02:01-DRB1*12:02:01-DQB1*05:02:01  China Zhejiang Han 0.02881,734
 40  A*02:01:01-B*40:01:02-C*15:02:01-DRB1*12:02:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 41  A*02:01:01-B*40:02:01-C*15:02:01-DRB1*12:02:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 42  A*02:01:01-B*40:06:01-C*07:02:01-DRB1*12:01:01-DQB1*03:02:01  China Zhejiang Han 0.02881,734
 43  A*02:01:01-B*40:229-C*06:02:01-DRB1*12:01:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 44  A*02:01-B*40:01-C*03:04-DRB1*12:01  Germany DKMS - Greece minority 0.02601,894
 45  A*02:01-B*40:06-C*08:01-DRB1*12:02  Japan pop 16 0.026018,604
 46  A*02:01-B*40:02-C*03:03-DRB1*12:01  Japan pop 16 0.021018,604
 47  A*02:01-B*40:06-C*01:02-DRB1*12:02-DQB1*03:01  India Tamil Nadu 0.02012,492
 48  A*02:01-B*40:02-C*15:02-DRB1*12:02  Hong Kong Chinese BMDR 0.01957,595
 49  A*02:01-B*40:02-C*03:03-DRB1*12:01  Hong Kong Chinese BMDR 0.01787,595
 50  A*02:01-B*40:02-DRB1*12:01  Israel Kavkazi Jews 0.01762,840
 51  A*02:01-B*40:06-C*08:01-DRB1*12:01-DQB1*03:01  India West UCBB 0.01725,829
 52  A*02:01-B*40:01-C*03:04-DRB1*12:01  Japan pop 16 0.016018,604
 53  A*02:01:01-B*40:01:02-C*07:02:01-DRB1*12:01:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01575,266
 54  A*02:01:01-B*40:01:02-C*07:02:01-DRB1*12:02:01-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.01545,266
 55  A*02:01-B*40:01-C*04:03-DRB1*12:02  Hong Kong Chinese BMDR 0.01477,595
 56  A*02:01:01-B*40:01:02-C*15:02:01-DRB1*12:01:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01435,266
 57  A*02:01-B*40:01-C*03:04-DRB1*12:01  Poland DKMS 0.013820,653
 58  A*02:01:01-B*40:01:02-C*07:02:01-DRB1*12:01:01-DPB1*13:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01235,266
 59  A*02:01-B*40:06-C*08:01-DRB1*12:01-DQB1*03:01  India Central UCBB 0.01194,204
 60  A*02:01-B*40:02-DRB1*12:01  Hong Kong Chinese cord blood registry 0.01113,892
 61  A*02:01-B*40:02-C*03:03-DRB1*12:01-DQB1*03:01  USA Asian pop 2 0.01101,772
 62  A*02:01-B*40:02-DRB1*12:01  Israel Poland Jews 0.010313,871
 63  A*02:01-B*40:01-C*03:04-DRB1*12:01-DQB1*03:01-DPB1*04:01  Germany DKMS - German donors 0.01013,456,066
 64  A*02:01-B*40:01-C*03:04-DRB1*12:02  Japan pop 16 0.010018,604
 65  A*02:01-B*40:01-C*15:02-DRB1*12:01  Japan pop 16 0.010018,604
 66  A*02:01-B*40:02-C*03:03-DRB1*12:01-DQB1*03:01  Germany DKMS - Turkey minority 0.01004,856
 67  A*02:01-B*40:02-C*03:04-DRB1*12:01  Japan pop 16 0.010018,604
 68  A*02:01-B*40:40-C*03:04-DRB1*12:01-DQB1*03:01  Germany DKMS - Turkey minority 0.01004,856
 69  A*02:01:01-B*40:01:02-C*07:02:01-DRB1*12:01:01-DPB1*17:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00955,266
 70  A*02:01:01-B*40:01:02-C*03:04:01-DRB1*12:01:01-DQB1*03:01:01  Poland BMR 0.009523,595
 71  A*02:01:01-B*40:02:01-C*03:03:01-DRB1*12:01:01-DPB1*135:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00925,266
 72  A*02:01-B*40:06-DRB1*12:02  Hong Kong Chinese cord blood registry 0.00903,892
 73  A*02:01-B*40:06-C*15:02-DRB1*12:01-DQB1*03:01  India North UCBB 0.00855,849
 74  A*02:01:01-B*40:01:02-C*03:17:01-DRB1*12:02:01-DPB1*21:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00795,266
 75  A*02:01:01-B*40:01:02-C*03:04:01-DRB1*12:02:01-DPB1*21:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00685,266
 76  A*02:01-B*40:01-DRB1*12:01  Israel Iran Jews 0.00618,153
 77  A*02:01:01-B*40:01:02-C*04:82-DRB1*12:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00555,266
 78  A*02:01:01-B*40:02:01-C*07:02:01-DRB1*12:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00555,266
 79  A*02:01-B*40:01-C*03:02-DRB1*12:02  Hong Kong Chinese BMDR 0.00557,595
 80  A*02:01:01-B*40:01:02-C*07:02:01-DRB1*12:01:01-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00515,266
 81  A*02:01-B*40:02-C*01:02-DRB1*12:01  Japan pop 16 0.005018,604
 82  A*02:01-B*40:02-C*01:02-DRB1*12:02  Japan pop 16 0.005018,604
 83  A*02:01-B*40:02-C*03:04-DRB1*12:02  Japan pop 16 0.005018,604
 84  A*02:01-B*40:03-C*03:04-DRB1*12:01  Japan pop 16 0.005018,604
 85  A*02:01-B*40:03-C*03:04-DRB1*12:02  Japan pop 16 0.005018,604
 86  A*02:01-B*40:06-C*03:03-DRB1*12:01  Japan pop 16 0.005018,604
 87  A*02:01-B*40:06-C*08:01-DRB1*12:01  Japan pop 16 0.005018,604
 88  A*02:01-B*40:01-C*04:03-DRB1*12:01  Hong Kong Chinese BMDR 0.00427,595
 89  A*02:01-B*40:02-DRB1*12:02  Israel Poland Jews 0.003613,871
 90  A*02:01-B*40:06-C*03:03-DRB1*12:01  Hong Kong Chinese BMDR 0.00337,595
 91  A*02:01-B*40:02-DRB1*12:01  Israel USSR Jews 0.002245,681
 92  A*02:01:01-B*40:01:02-C*03:04:01-DRB1*12:01:01-DQB1*03:12  Poland BMR 0.002123,595

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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