Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Population:  Country:  Source of dataset : 
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Displaying 1 to 100 (from 252) records   Pages: 1 2 3 of 3  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*39:01-DRB1*12:02:01  Taiwan Saisiat 24.400051
 2  B*39:01-DRB1*12:02:01  Taiwan Atayal 8.0000106
 3  B*39:01-DRB1*12:02:01  Taiwan Taroko 3.500055
 4  B*39:01-DRB1*12:01  Taiwan Rukai 2.000050
 5  B*39:01-DRB1*12:02:01  Taiwan Bunun 2.0000101
 6  A*24:02-B*39:01-DRB1*12:02  Taiwan Tzu Chi Morrow Donor Registry Aborigine 1.9310233
 7  A*24:02-B*39:01-C*12:03-DRB1*12:01  Russia Bering Island Aleuts 1.9231104
 8  A*02-B*39-DRB1*12-DQB1*03:01  Mexico Chiapas, Tuxtla Gutierrez 1.886852
 9  A*02-B*39-DRB1*12  Brazil Parana Oriental 1.500033
 10  A*03:01:01-B*39:01:01-C*07:04:01-DRB1*12:10-DQB1*06:03:01-DPA1*01:03:01-DPB1*04:01:01  Brazil Rio de Janeiro Black 1.470668
 11  A*24:02-B*39:01-DRB1*12:01  New Zealand Maori with Full Ancestry 1.100046
 12  A*31:01-B*39:01-DRB1*12:01  Sweden Northern Sami 1.0000154
 13  B*39:01-DRB1*12:02:01  Taiwan Rukai 1.000050
 14  B*39:01-DRB1*12:02:01  Philippines Ivatan 1.000050
 15  A*24:02-B*39:01-DRB1*12:01  New Zealand Maori with Admixed History 0.9524105
 16  A*24-B*39-C*07-DRB1*12  Myanmar Shan 0.926054
 17  A*01-B*39-DRB1*12-DQB1*03:01  Mexico Chihuahua Chihuahua City 0.8403119
 18  A*02:50-B*39:01-C*12:03-DRB1*12:01-DQB1*06:02  Iran Gorgan 0.780064
 19  A*03:01-B*39:01-C*12:03-DRB1*12:09-DQB1*04:01  Iran Gorgan 0.780064
 20  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01  China Jingpo Minority 0.5210105
 21  A*11:01:01-B*39:01:01-DRB1*12:02:01  China Jingpo Minority 0.5210105
 22  B*39:01:01-C*07:02:01-DRB1*12:02:01  China Jingpo Minority 0.5210105
 23  B*39:01:01-DRB1*12:02:01  China Jingpo Minority 0.5210105
 24  A*01-B*39-DRB1*12-DQB1*03:01  Mexico Yucatan, Merida 0.5128192
 25  A*02:01-B*39:01-C*12:03-DRB1*12:01  Russia Bering Island Aleuts 0.4808104
 26  A*68:01-B*39:01-C*12:03-DRB1*12:01  Russia Bering Island Aleuts 0.4808104
 27  A*26:01-B*39:01-C*12:03-E*01:01:01-F*01:01:01-G*01:01-DRB1*12:01-DQA1*05:05-DQB1*03:01  Portugal Azores Terceira Island 0.4386130
 28  A*68:01-B*39:01-C*12:03-DRB1*12:01-DQA1*01:02-DQB1*03:01  Kosovo 0.4030124
 29  A*02-B*39-C*12-DRB1*12  Macedonia MBMDR - Albanian 0.3906128
 30  A*02-B*39-C*12:03-DRB1*12-DQB1*03  Russia North Ossetian 0.3900127
 31  A*02-B*39-DRB1*12  Albania pop 2 0.3900432
 32  A*03:01:01-B*39:01:01-C*12:03:01-DRB1*12:01:01-DQB1*03:01:01-DPA1*01:03:01-DPB1*04:01:01  Brazil Rio de Janeiro Caucasian 0.3891521
 33  A*02:01-B*39:31-C*12:03-DRB1*12:01  Germany DKMS - Bosnia and Herzegovina minority 0.38901,028
 34  A*01-B*39-DRB1*12-DQB1*03:01  Mexico Yucatan Rural 0.3731132
 35  A*24-B*39-C*05-DRB1*12-DQB1*03  Albania pop 2 0.3400432
 36  A*02:01-B*39:01-C*12:03-DRB1*12:01  Italy pop 5 0.3000975
 37  A*24:02:01:01-B*39:01:01-C*12:03:01:01-DRB1*12:01-DQB1*03:01  Russia Bashkortostan, Tatars 0.2604192
 38  A*02:06-B*39:01-C*07:02-DRB1*12:02-DQB1*03:02  Malaysia Peninsular Chinese 0.2577194
 39  A*11:01-B*39:01-C*07:02-DRB1*12:02-DQB1*05:02  Malaysia Peninsular Chinese 0.2577194
 40  A*02-B*39-DRB1*12-DQB1*03:01  Mexico Coahuila, Torreon 0.2500396
 41  A*68-B*39-DRB1*12-DQB1*03:01  Mexico Oaxaca Rural 0.2053485
 42  A*03:01:01-B*39:10:01-C*07:02:01-DRB1*12:01:01-DQB1*03:01:01-DPA1*01:03:01-DPB1*04:01:01  Brazil Rio de Janeiro Caucasian 0.1946521
 43  A*24:02:01-B*39:01:01-C*05:01:01-DRB1*12:10-DQB1*03:04:01-DPA1*01:03:01-DPB1*04:01:01  Brazil Rio de Janeiro Caucasian 0.1946521
 44  A*02:01-B*39:31-C*12:03-DRB1*12:01  Germany DKMS - Croatia minority 0.19402,057
 45  A*31-B*39-DRB1*12  Russia Moscow Pop 2 0.19002,000
 46  A*02-B*39-C*12-DRB1*12  Macedonia MBMDR - Macedonian 0.18721,283
 47  A*02-B*39-C*12-DRB1*12  Macedonia 0.1748286
 48  A*02-B*39-DRB1*12  Macedonia 0.1748286
 49  B*39-DRB1*12  Macedonia 0.1748286
 50  B*39:01-DRB1*12:01  Italy pop 5 0.1600975
 51  A*31:01-B*39:01-C*12:03-DRB1*12:01  Poland DKMS 0.157020,653
 52  A*02:01-B*39:01-C*12:03-DRB1*12:01-DQB1*03:01  Italy pop 5 0.1400975
 53  A*24:02-B*39:01-C*15:02-DRB1*12:01-DQB1*03:01  Italy pop 5 0.1400975
 54  A*01-B*39-DRB1*12-DQB1*03:01  Mexico Tlaxcala Rural 0.1205830
 55  A*11:01:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DQB1*03:01:01  China Zhejiang Han 0.11721,734
 56  A*31-B*39-C*12-DRB1*12  Macedonia MBMDR - Macedonian 0.11691,283
 57  A*31:01:02-B*39:01:01-C*12:03:01-DRB1*12:01:01-DQB1*03:01:01  Poland BMR 0.114623,595
 58  A*02-B*39-DRB1*12-DQB1*03:01  Mexico Nuevo Leon Rural 0.1136439
 59  A*01:01-B*39:01-C*12:03-DRB1*12:01-DQB1*03:01-DPB1*04:01  Russia Karelia 0.11291,075
 60  A*02:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Netherlands minority 0.10901,374
 61  A*11:01:01:01-B*39:01:01-C*12:03:01:01-DRB1*12:01-DQB1*03:01  Russia Nizhny Novgorod, Russians 0.09931,510
 62  A*02:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - United Kingdom minority 0.09601,043
 63  A*11:01-B*39:01-DRB1*12:02  Hong Kong Chinese cord blood registry 0.09323,892
 64  A*31:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Romania minority 0.08101,234
 65  A*24-B*39-DRB1*12  Albania pop 2 0.0800432
 66  A*02:01-B*39:31-C*12:03-DRB1*12:01  Germany DKMS - Greece minority 0.07901,894
 67  A*02:03-B*39:01-C*07:02-DRB1*12:02  Germany DKMS - China minority 0.07801,282
 68  A*31:01-B*39:01-C*07:02-DRB1*12:02  Germany DKMS - China minority 0.07801,282
 69  A*33:03-B*39:05-C*03:04-DRB1*12:01  Germany DKMS - China minority 0.07801,282
 70  A*31:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Netherlands minority 0.07301,374
 71  A*02:01-B*39:01-C*07:02-DRB1*12:02  Hong Kong Chinese BMDR 0.06947,595
 72  A*02:01-B*39:01-DRB1*12:02  Hong Kong Chinese cord blood registry 0.06023,892
 73  A*02:01-B*39:01-C*12:03-DRB1*12:01  Poland DKMS 0.058320,653
 74  A*02:03:01-B*39:01:01-C*07:02:01-DRB1*12:01:01-DQB1*03:01:01  China Zhejiang Han 0.05771,734
 75  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DQB1*03:01:01  China Zhejiang Han 0.05771,734
 76  A*02:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Croatia minority 0.05502,057
 77  A*02:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Greece minority 0.05301,894
 78  A*02:06-B*39:01-C*12:03-DRB1*12:02-DQB1*05:01  Malaysia Peninsular Malay 0.0526951
 79  A*24:02-B*39:05-C*07:01-DRB1*12:02-DQB1*03:01  Malaysia Peninsular Malay 0.0526951
 80  A*24:07-B*39:15-C*15:02-DRB1*12:02-DQB1*03:01  Malaysia Peninsular Malay 0.0526951
 81  A*02:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Bosnia and Herzegovina minority 0.04901,028
 82  A*31:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Croatia minority 0.04902,057
 83  A*01:01-B*39:06-C*07:02-DRB1*12:01  Germany DKMS - United Kingdom minority 0.04801,043
 84  A*11:01-B*39:01-C*04:01-DRB1*12:01  Germany DKMS - United Kingdom minority 0.04801,043
 85  A*31:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - United Kingdom minority 0.04801,043
 86  A*24:02-B*39:01-C*07:02-DRB1*12:01-DQB1*03:01  USA Hispanic pop 2 0.04701,999
 87  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*12:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.04555,266
 88  A*02:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Spain minority 0.04501,107
 89  A*31:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Spain minority 0.04501,107
 90  A*02:03-B*39:01-C*07:02-DRB1*12:02-DQB1*03:01  USA Asian pop 2 0.04401,772
 91  A*02:06-B*39:01-C*07:02-DRB1*12:01-DQB1*03:01  USA Asian pop 2 0.04401,772
 92  A*11:01-B*39:15-C*15:02-DRB1*12:02-DQB1*03:01  USA Asian pop 2 0.04401,772
 93  A*02:01-B*39:01-C*07:02-DRB1*12:01  Poland DKMS 0.043520,653
 94  A*01:01-B*39:01-C*04:01-DRB1*12:01  Germany DKMS - Portugal minority 0.04301,176
 95  A*01:01-B*39:24-C*07:01-DRB1*12:01  Germany DKMS - Portugal minority 0.04301,176
 96  A*03:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Portugal minority 0.04301,176
 97  A*02:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Romania minority 0.04101,234
 98  A*02:01-B*39:31-C*12:03-DRB1*12:01  Germany DKMS - Romania minority 0.04101,234
 99  A*25:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Romania minority 0.04101,234
 100  A*26:01-B*39:01-C*12:03-DRB1*12:01  Germany DKMS - Romania minority 0.04101,234

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 252) records   Pages: 1 2 3 of 3  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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