Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 197) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*32:01-B*39:01-DRB1*13:01  Sweden Northern Sami 1.7000154
 2  A*31:01:02-B*39:03:01-C*18:02:01-DRB1*13:01:01-DQB1*05:01:01-DPA1*01:03:01-DPB1*14:01:01  Brazil Rio de Janeiro Black 1.470668
 3  A*02-B*39-DRB1*13:01  Colombia Barranquilla 1.3300188
 4  A*24:02-B*39:01-C*12:03-E*01:01:01-F*01:01:01-G*01:01-DRB1*13:01-DQA1*01:03-DQB1*06:03  Portugal Azores Terceira Island 0.8772130
 5  A*02-B*39-DRB1*13:01-DQB1*03:03  Bolivia Quechua 0.720069
 6  A*02:01-B*39:01-DRB1*13:01-DQB1*05:01  Mexico Veracruz Xalapa 0.595284
 7  A*11:01:01-B*39:01:01-C*12:03:01-DRB1*13:01:01-DQB1*06:03:01  India Kerala Malayalam speaking 0.4210356
 8  A*24:02:01-B*39:01:01-C*03:03:01-DRB1*13:01:01-DQA1*03:01:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*02:01  Russian Federation Vologda Region 0.4202119
 9  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*13:01:01-DQA1*03:01:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*02:01:02  Russian Federation Vologda Region 0.4202119
 10  A*32:01:01-B*39:01:01-C*12:03:01-DRB1*13:01:01-DQA1*01:03:01-DQB1*06:03:01-DPA1*01:03:01-DPB1*04:01  Russian Federation Vologda Region 0.4202119
 11  A*32:01:01-B*39:01:01-C*12:03:01:01-DRB1*13:01:01-DQB1*06:03  Russia Bashkortostan, Bashkirs 0.4167120
 12  A*02:05:01-B*39:10:01-C*12:03:01-DRB1*13:01:01-DQB1*06:03:01-DPB1*01:01:01  South African Black 0.3520142
 13  A*02:05:01-B*39:10:01-C*18:02-DRB1*13:01:01-DQB1*06:03:01-DPB1*01:01:01  South African Black 0.3520142
 14  A*11-B*39-C*07:02-DRB1*13:01-DQB1*06  Russia Transbaikal Territory Buryats 0.3340150
 15  A*33:01:01-B*39:06:02-C*08:02:01-DRB1*13:01:01-DQB1*04:02:01-DPA1*01:03:01-DPB1*04:01:01  Brazil Barra Mansa Rio State Caucasian 0.3125405
 16  A*33-B*39-DRB1*13:01  Colombia Barranquilla 0.2700188
 17  A*02:01-B*39:01-C*12:03-DRB1*13:01-DQA1*01:03-DQB1*06:03-DPB1*02:01  USA San Diego 0.2600496
 18  A*01:01:01-B*39:01:01-C*14:02:01-DRB1*13:01:01-DQB1*06:03:01  Spain, Canary Islands, Gran canaria island 0.2300215
 19  A*11:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  India Tamil Nadu 0.22082,492
 20  A*68:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  USA NMDP Caribean Indian 0.181414,339
 21  A*02:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  Germany DKMS - Italy minority 0.16101,159
 22  A*02:01:01:01-B*39:01:01-C*12:03:01:01-DRB1*13:01:01-DQB1*06:03:01  Russia Nizhny Novgorod, Russians 0.15251,510
 23  A*24:02-B*39:01-DRB1*13:01-DQB1*06:03  Mexico Mexico City Tlalpan 0.1515330
 24  A*30:01-B*39:01-DRB1*13:01-DQB1*06:04  Mexico Mexico City Tlalpan 0.1515330
 25  A*24:02:01-B*39:01:01-C*04:01:01-DRB1*13:01:01-DQB1*06:03:01  India Kerala Malayalam speaking 0.1400356
 26  A*31:01:02-B*39:01:01-C*12:03:01-DRB1*13:01:01-DQB1*06:03:01  India Kerala Malayalam speaking 0.1400356
 27  A*03:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Austria minority 0.11801,698
 28  A*31:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03-DPB1*13:01  Russia Karelia 0.11291,075
 29  A*03:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Croatia minority 0.10802,057
 30  A*24:02-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03-DPB1*02:01  Russia Karelia 0.10801,075
 31  A*11:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  India Central UCBB 0.10704,204
 32  A*01:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Bosnia and Herzegovina minority 0.09701,028
 33  A*32:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Croatia minority 0.09702,057
 34  A*11:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  India North UCBB 0.09405,849
 35  A*32:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Austria minority 0.08801,698
 36  A*02:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Portugal minority 0.08501,176
 37  A*03:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Romania minority 0.08101,234
 38  A*11-B*39-DRB1*13:01-DQA1*05:05-DQB1*03:02  Brazil Paraná Caucasian 0.0780641
 39  A*30-B*39-DRB1*13:01-DQA1*01:03-DQB1*06:03  Brazil Paraná Caucasian 0.0780641
 40  A*02:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Croatia minority 0.07302,057
 41  A*31:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Netherlands minority 0.07301,374
 42  A*03:01:01-B*39:01:01-C*12:03:01-DRB1*13:01:01-DQB1*06:03:01  Poland BMR 0.070223,595
 43  A*24:02-B*39:01-C*12:03-DRB1*13:01-DQA1*01:03-DQB1*06:03-DPB1*10:01  Sri Lanka Colombo 0.0700714
 44  A*33:03-B*39:01-C*12:03-DRB1*13:01-DQA1*01:03-DQB1*06:03-DPB1*04:01  Sri Lanka Colombo 0.0700714
 45  A*24:02-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.06804,335
 46  A*03:01:01:01-B*39:01:01-C*12:03:01:01-DRB1*13:01:01-DQB1*06:03:01  Russia Nizhny Novgorod, Russians 0.06741,510
 47  A*02:01:01-B*39:01:01-C*12:03:01-DRB1*13:01:01-DQB1*06:03:01  Poland BMR 0.065923,595
 48  A*02:01-B*39:01-C*12:03-DRB1*13:01  Poland DKMS 0.060920,653
 49  A*03:01-B*39:01-C*12:03-DRB1*13:01  Poland DKMS 0.058820,653
 50  A*02:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Netherlands minority 0.05801,374
 51  A*02:16-B*39:11-DRB1*13:01  Israel Bukhara Jews 0.05752,317
 52  A*02:17-B*39:11-DRB1*13:01  Israel Bukhara Jews 0.05752,317
 53  A*02:36-B*39:11-DRB1*13:01  Israel Bukhara Jews 0.05752,317
 54  A*32:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03-DPB1*04:01  Russia Karelia 0.05621,075
 55  A*24:02-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Greece minority 0.05301,894
 56  A*02:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Romania minority 0.05201,234
 57  A*11:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  India West UCBB 0.05155,829
 58  A*11:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  India South UCBB 0.051111,446
 59  B*39:01-DRB1*13:01  Italy pop 5 0.0500975
 60  A*03:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Bosnia and Herzegovina minority 0.04901,028
 61  A*68:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Bosnia and Herzegovina minority 0.04901,028
 62  A*24:02-B*39:06-C*07:02-DRB1*13:01  Germany DKMS - United Kingdom minority 0.04801,043
 63  A*02:01-B*39:06-C*07:02-DRB1*13:01  Germany DKMS - Spain minority 0.04501,107
 64  A*03:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Spain minority 0.04501,107
 65  A*03:02-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Spain minority 0.04501,107
 66  A*30:01-B*39:01-C*16:02-DRB1*13:01  Germany DKMS - Spain minority 0.04501,107
 67  A*68:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Spain minority 0.04501,107
 68  A*02:05-B*39:10-C*12:03-DRB1*13:01-DQB1*06:09  USA African American pop 4 0.04402,411
 69  A*03:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  USA Asian pop 2 0.04401,772
 70  A*30:02-B*39:10-C*12:03-DRB1*13:01-DQB1*06:09  USA African American pop 4 0.04402,411
 71  A*68:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  USA African American pop 4 0.04402,411
 72  A*02:01-B*39:01-DRB1*13:01  Israel Bukhara Jews 0.04322,317
 73  A*11:01-B*39:31-C*12:03-DRB1*13:01-DQB1*06:03  Germany DKMS - Italy minority 0.04301,159
 74  A*66:01-B*39:06-C*07:02-DRB1*13:01  Germany DKMS - Romania minority 0.04101,234
 75  A*02:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - France minority 0.03601,406
 76  A*11:01-B*39:24-C*07:01-DRB1*13:01  Germany DKMS - France minority 0.03601,406
 77  A*23:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - France minority 0.03601,406
 78  A*24:02-B*39:06-C*07:02-DRB1*13:01  Germany DKMS - France minority 0.03601,406
 79  A*01:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  India West UCBB 0.03435,829
 80  A*03:01-B*39:06-C*07:02-DRB1*13:01-DQB1*06:03  Colombia Bogotá Cord Blood 0.03421,463
 81  A*02:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 82  A*03:01-B*39:68-C*12:03-DRB1*13:01-DQB1*06:03  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 83  A*33:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 84  A*01:01:01:01-B*39:01:01-C*12:03:01:01-DRB1*13:01:01-DQB1*06:03:01  Russia Nizhny Novgorod, Russians 0.03311,510
 85  A*03:01:01:01-B*39:01:01:03-C*07:02:01-DRB1*13:01:01-DQB1*06:03:01  Russia Nizhny Novgorod, Russians 0.03311,510
 86  A*11:01:01:01-B*39:01:01-C*12:03:01:01-DRB1*13:01:01-DQB1*06:03:01  Russia Nizhny Novgorod, Russians 0.03311,510
 87  A*32:01:01-B*39:01:01-C*12:03:01:01-DRB1*13:01:01-DQB1*06:03:01  Russia Nizhny Novgorod, Russians 0.03311,510
 88  A*32:01:01-B*39:01:01-C*12:03:01:01-DRB1*13:01-DQB1*06:03:01  Russia Nizhny Novgorod, Russians 0.03311,510
 89  A*01:01-B*39:01-C*02:02-DRB1*13:01  Germany DKMS - Austria minority 0.02901,698
 90  A*68:01-B*39:01-C*12:03-DRB1*13:01  Germany DKMS - Austria minority 0.02901,698
 91  A*11:01-B*39:01-C*12:03-DRB1*13:01  Poland DKMS 0.028020,653
 92  A*26:01:01-B*39:01:01-C*12:03:01-DRB1*13:01:01-DQB1*06:03:01  Poland BMR 0.026923,595
 93  A*01:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  India Central UCBB 0.02384,204
 94  A*26:01-B*39:01-C*12:03-DRB1*13:01  Poland DKMS 0.023820,653
 95  A*01:01-B*39:01-C*12:03-DRB1*13:01-DQB1*06:03  India South UCBB 0.023311,446
 96  A*02:01-B*39:01-C*07:02-DRB1*13:01-DQB1*06:03  USA Hispanic pop 2 0.02301,999
 97  A*02:02-B*39:11-DRB1*13:01  Israel Bukhara Jews 0.02162,317
 98  A*31:01:02-B*39:01:01-C*12:03:01-DRB1*13:01:01-DQB1*06:03:01  Poland BMR 0.020023,595
 99  A*32:01-B*39:01-C*12:03-DRB1*13:01  Poland DKMS 0.019820,653
 100  A*31:01-B*39:01-C*12:03-DRB1*13:01  Poland DKMS 0.017920,653

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 197) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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