Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 397) records   Pages: 1 2 3 4 of 4  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:01-B*39:09-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 33.700073
 2  A*02:04-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 19.800073
 3  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 11.940367
 4  A*24:02-B*39:05-C*07:02-DRB1*04:03-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 9.300073
 5  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 5.5944143
 6  B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 4.861172
 7  A*02:04-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*14:01  Venezuela Sierra de Perija Yucpa 4.700073
 8  A*68:01-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 4.1284218
 9  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 4.0600234
 10  A*24:02-B*39:01-C*07:02-DRB1*04:04  Russia Bering Island Aleuts 3.8462104
 11  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 3.4404218
 12  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 13  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.777872
 14  A*68:03:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.777872
 15  A*24:02-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.238867
 16  A*24:02:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 2.083372
 17  A*02:01:01-B*39:08-C*07:02:01-DRB1*04:07  Costa Rica Amerindians (G) 1.9962125
 18  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.7483143
 19  A*31:01-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 1.6667150
 20  A*68:03-B*39:05-C*07:02-DRB1*04:07  USA Mexican American Mestizo 1.6000553
 21  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.3986143
 22  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*04:03:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 1.388972
 23  A*02-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 1.388972
 24  A*24-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 1.388972
 25  A*68-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 1.388972
 26  A*31:01-B*39:01-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 1.3333150
 27  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.2800234
 28  A*24:02-B*39:01-C*07:02-DRB1*04:04-DQB1*03:02-DPB1*02:01  Russia Karelia 1.27031,075
 29  A*02:13-B*39:05-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*14:01  Venezuela Sierra de Perija Yucpa 1.200073
 30  A*68:01-B*39:09-C*07:02-DRB1*04:03-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 1.200073
 31  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 1.1468218
 32  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 33  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 34  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 35  A*24:02-B*39:02-C*07:02-DRB1*04:11-DQA1*05:03-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 36  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 37  A*68:01-B*39:02-C*07:02-DRB1*04:11-DQA1*03:03-DQB1*04:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 38  A*68:01-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 39  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 1.0523261,235
 40  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 41  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 42  A*24:02-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 43  A*31:12-B*39:01-C*07:02-DRB1*04:07-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 44  A*68-B*39-C*07-DRB1*04  Myanmar Shan 0.926054
 45  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.8600234
 46  A*68:05-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Amerindians (G) 0.8065125
 47  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.74801,999
 48  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 49  A*31:01-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 50  A*68:01-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 51  A*68:01-B*39:06-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 52  A*68:03-B*39:02-C*07:02-DRB1*04:03-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 53  A*68:03-B*39:02-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 54  A*68:03-B*39:05-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 55  A*68:03-B*39:05-C*07:02-DRB1*04:11-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 56  B*39:05-C*07:02-DRB1*04:11-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 57  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 58  A*01:01:01-B*39:01:01-C*07:01:01-DRB1*04:03:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 59  A*01:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 60  A*01-B*39-C*07-DRB1*04-DQA1*01-DQB1*06  Mexico Tapachula, Chiapas Mestizo Population 0.694472
 61  A*01-B*39-C*07-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 0.694472
 62  A*02:01:01-B*39:02:02-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 63  A*02:01:01-B*39:05:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 64  A*31:01:02-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 65  A*68:01:01-B*39:01:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 66  B*39-C*07-DRB1*04-DQA1*01-DQB1*06  Mexico Tapachula, Chiapas Mestizo Population 0.694472
 67  A*24:02-B*39:06-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.6881218
 68  A*68:01-B*39:01-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.6881218
 69  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 0.6700261,235
 70  A*02:01-B*39:04-C*07:01-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 0.6667150
 71  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.6494339
 72  A*02:03:01-B*39:01:01-C*07:02:01-DRB1*04:05:01-DQB1*04:01:01  India Karnataka Kannada Speaking 0.5750174
 73  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.5534146,714
 74  A*24:02:01:01-B*39:01:01:03-C*07:02:01-DRB1*04:04:01-DQB1*03:02  Russia Nizhny Novgorod, Russians 0.52751,510
 75  A*33:03:01-B*39:01:01-C*07:02:01-DRB1*04:05:01-DQB1*04:01:01  Vietnam Kinh 0.4950101
 76  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.46501,999
 77  A*02:06-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 78  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 79  A*68:03-B*39:01-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 80  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*03:01  Mexico Chiapas Lacandon Mayans 0.4587218
 81  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 82  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:11:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 83  A*02:11:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 84  A*02:22:01-B*39:11-C*07:02:01-DRB1*04:10:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 85  A*68:03:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 86  A*02:33-B*39:02-C*07:02-DRB1*04:07-DQA1*05:01-DQB1*03:01-DPB1*04:02  Nicaragua Managua 0.4329339
 87  A*68:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339
 88  B*39:06-C*07:02-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4300234
 89  B*39:08-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4300234
 90  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4274234
 91  A*24:02:01-B*39:01:01-C*07:02:01-DRB1*04:04:01-DQB1*03:02  Russia Bashkortostan, Bashkirs 0.4167120
 92  A*24:02-B*39:01-C*07:02-DRB1*04:04-DQB1*03:02-DPB1*04:01  Russia Karelia 0.36131,075
 93  A*02:01-B*39:02-C*07:02-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 94  A*03:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 95  A*24:02-B*39:05-C*07:02-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 96  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 97  A*24:02-B*39:06-C*07:02-DRB1*04:08-DQB1*03:01  Mexico Mexico City Mestizo population 0.3497143
 98  A*31:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 99  B*39:02-C*07:02-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 100  B*39:05-C*07:02-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 397) records   Pages: 1 2 3 4 of 4  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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