HLA > Allele Frequency Search > Classical

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Displaying 1 to 20 (from 20) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   C*01:02  Italy North  0.0200277See
 2   C*02:02  Italy North  0.0270277See
 3   C*03:02  Italy North  0.0070277See
 4   C*03:03  Italy North  0.0230277See
 5   C*03:04  Italy North  0.0110277See
 6   C*04:01  Italy North  0.1480277See
 7   C*05:01  Italy North  0.0450277See
 8   C*06:02  Italy North  0.0920277See
 9   C*07:01  Italy North  0.1440277See
 10   C*07:02  Italy North  0.0600277See
 11   C*07:04  Italy North  0.0130277See
 12   C*08:02  Italy North  0.0220277See
 13   C*12:02  Italy North  0.0470277See
 14   C*12:03  Italy North  0.1500277See
 15   C*14:02  Italy North  0.0490277See
 16   C*15:02  Italy North  0.0690277See
 17   C*16:01  Italy North  0.0430277See
 18   C*16:02  Italy North  0.0230277See
 19   C*16:04  Italy North  0.0020277See
 20   C*17:01  Italy North  0.0050277See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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