Populations Publication Details

Population: 
   

  

India Andhra Pradesh Telugu Speaking

Polymorphic Region:
HLA

Demographic Data

 
  Ethnic origin: Andhra Pradesh, Telangana
  Geographic Region: South Asia
  Latitude:
  Longitude:
  Family: Not Known
  Urban/Rural: Urban

Sample Data

 
  Sample Size: 186
  Test date: 2017
  Method(s): NGS
  Source: Bone Marrow Registry
  Loci typed: A, B, C, DQB1, DRB1
  Additional notes: Allele frequencies at each HLA locus were evaluated for deviations from Hardy- Weinberg equilibrium proportions using a modified version of Guo and Thompson algorithm as implemented in Pypop 0.7.0. Haplotype frequencies were estimated using the itera
 

Bibliographic Reference

 
  Author(s): Vani Seshasubramanian, Nirmal Kumar Manisekar, Aruna Devi Sa
  Publication details: Next Generation Sequencing in HLA Haplotype distribution among Telugu Speaking Population from South India. Human Immunology short population report
  Author's e-mail: vani@jeevan.org
 

Frequency Data

 
Allele Frequencies Haplotype Frequencies  Genotype Data
(download csv)
Ambiguity-resolved Genotype Data
(download csv)
 






Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations.
Gonzalez-Galarza FF, Takeshita LY, Santos EJ, Kempson F, Maia MH, Silva AL, Silva AL, Ghattaoraya GS, Alfirevic A, Jones AR and Middleton D Nucleic Acid Research 2015, 39, 28, D784-8.
Liverpool, U.K.

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