Allele Frequency Net Database
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Population: 
   

  

India Andhra Pradesh Telugu Speaking

Polymorphic Region:
HLA

Demographic Data

 
  Ethnic origin: Asian
  Geographic Region: South Asia
  Latitude: 13º 4' N
  Longitude: 80º 14' E
  Family: Not Known
  Urban/Rural: Urban

Sample Data

 
  Sample Size: 186
  Test date: 2017
  Method(s): NGS
  Source: Bone Marrow Registry
  Loci typed: A, B, C, DQB1, DRB1
  Additional notes: Allele frequencies at each HLA locus were evaluated for deviations from Hardy- Weinberg equilibrium proportions using a modified version of Guo and Thompson algorithm as implemented in Pypop 0.7.0. Haplotype frequencies were estimated using the itera
 

Bibliographic Reference

 
  Author(s): Vani Seshasubramanian, Nirmal Kumar Manisekar, Aruna Devi Sa
  Publication details: Next Generation Sequencing in HLA Haplotype distribution among Telugu Speaking Population from South India. Human Immunology short population report
  Author's e-mail: vani@jeevan.org
 

Frequency Data

 
Allele Frequencies Haplotype Frequencies  Genotype Data
(download csv)
Ambiguity-resolved Genotype Data
(download csv)
 




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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