 | | India Tamil Nadu | | Polymorphic Region: | HLA |
Demographic Data
|
| |
| |
Ethnic origin: |
Asian |
| |
Geographic Region: |
South Asia |
| |
Latitude: |
11º 32' N
|
| |
Longitude: |
78º 52' E
|
| |
Family: |
Not Known |
| |
Urban/Rural: |
Urban and Rural |
Sample Data
|
| |
| |
Sample Size: |
2492
|
| |
Test date: |
2012 |
| |
Method(s): |
SSOP, SBT
|
| |
Source: |
Bone Marrow Registry |
| |
Loci typed: |
A , B, C, DQB1, DRB1
|
| |
Additional notes: |
HLA haplotype frequencies were estimated using an expectation maximization algorithm
Allele frequencies were then calculated by direct counting from estimated haplotype frequencies
Data was collapsed to g Groups as defined in the report from the Immunogenomics Data Analysis Working Group of the 16th International HLA and Immunogenetics Workshop (Int J Immunogenetics 2013,40,46-53)
Genotypes were then given at one field but haplotype and allele frequencies at 2 field, although the alleles named in allele frequency and haplotype data should be suffixed with "g" for example frequency of 24:02 is the frequency of 24:02g |
| |
Bibliographic Reference
|
| |
| |
Author(s): |
Saranya Narayan, Martin Maiers, Mike Halagan, Arunadevi Sat |
| |
Publication details: |
HLA-A, -B, -C, -DRB1 and –DQB1 haplotype frequencies from 2492 Cord Blood Units from Tamil speaking population from Tamil Nadu, India, Human Immunology short population report
|
| |
Author's e-mail: |
srinivasan@jeevan.org |
| |
Frequency Data
|
| |
|
|
Allele Frequencies
Genotype Data