Populations � Publication Details

Population: 
   

  

Nicaragua Managua

Polymorphic Region:
HLA

Demographic Data

 
  Ethnic origin:
  Geographic Region: South and Central America
  Latitude: 12� 7' N
  Longitude: 86� 10' W
  Family: Not Known
  Urban/Rural: Urban

Sample Data

 
  Sample Size: 339 (A = 334, B = 332, C = 273, DPB1 = 274, DQA1 = 256, DQB1 = 259, DRB1 = 334)
  Test date: 2017
  Method(s): Sequencing
  Source: Other
  Loci typed: A, B, C, DPB1, DQA1, DQB1, DRB1
  Additional notes: Not all donors were typed for all loci The number of donors typed for each locus was as follows A (334); B(332); C(273); DPB1 (274); DQA1(256); DQB1 (259); DRB1 (334) Only 231 individuals were typed for all seven loci and thus haplotype information was derived from those 231
 

Bibliographic Reference

 
  Author(s): Daniela Weiskopf
  Publication details:
  Author's e-mail: jsidney@lji.org
 

Frequency Data

 
Allele Frequencies Haplotype Frequencies  Genotype Data
(download csv)
 

License

 
 
Ambiguity-resolved Genotype Data
(download csv)
 






Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations.
Gonzalez-Galarza FF, Takeshita LY, Santos EJ, Kempson F, Maia MH, Silva AL, Silva AL, Ghattaoraya GS, Alfirevic A, Jones AR and Middleton D Nucleic Acid Research 2015, 39, 28, D784-8.
Liverpool, U.K.

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