South Africa Worcester

Polymorphic Region:

HLA

Demographic Data
	Ethnic origin:	Black
	Geographic Region:	Sub-Saharan Africa
	Latitude:	33º 39' S
	Longitude:	19º 27' E
	Family:	Not Known
	Urban/Rural:	Urban and Rural

Sample Data
	Sample Size:	159 (DPA1 = 61, DPB1 = 158, DQB1 = 158)
	Test date:	2014
	Method(s):	Sequencing
	Source:	Disease Study Patients
	Loci typed:	A, B, C, DPA1, DPB1, DQA1, DQB1, DRB1
	Additional notes:	DNA sequence-based typing at the HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, -DRB1, and -DRB3/4/5 loci was performed on samples provided by 159 individuals from the Worcester region of the Western Cape province of South Africa. The purpose of the stud

Bibliographic Reference
	Author(s):	Cecilia S. Lindestam Arlehamn
	Publication details:	Sequence-based HLA-A, -B, -C, -DP, -DQ and -DR typing of 159 individuals from the Worcester region of the Western Cape province of South Africa.
	Author's e-mail:	cecilia@lji.org

Frequency Data

Allele Frequencies Haplotype Frequencies   Genotype Data (download csv) Ambiguity-resolved Genotype Data (download csv)

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Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
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